HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		123.172
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:121.8 nTPM
HPA:121.8 nTPM
GTEx:78.8 nTPM
FANTOM5:75.1 Scaled Tags Per Million
Pig:86.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005792
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA005792
Hippocampal formation mean intensity 123.172
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 65.049
Molecular layer of the dentate gyrus 72.287
Granular dentate gyrus 123.172
CA1 - oriens layer 59.858
CA1 - pyramidal layer 39.002
CA1 - radiatum layer 34.033
CA2 - oriens layer 69.019
CA2 - pyramidal layer 99.747
CA2 - radiatum layer 82.428
CA3 - oriens layer 38.081
CA3 - pyramidal layer 32.411
CA3 - radiatum layer 37.983
Stratum lucidum 95.508
Lacunosum moleculare 37.075
Subiculum 24.389

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.8
Sample id Sample description nTPM
Hippocampus
nTPM: 49.1
2148 Female, age 91, left hemisphere 66.0
1898 Male, age 80, left hemisphere 54.4
2529 Female, age 94, left hemisphere 46.7
1911 Female, age 85, right hemisphere 45.3
2621 Female, age 67, right hemisphere 44.0
1855 Male, age 76, left hemisphere 38.3
Dentate gyrus
nTPM: 55.9
2531 Female, age 67, both hemispheres 74.1
1927 Female, age 91, both hemispheres 73.5
2528 Male, age 74, both hemispheres 61.0
2246 Female, age 85, both hemispheres 45.9
2530 Female, age 94, left hemisphere 44.5
2010 Male, age 76, both hemispheres 36.4
Entorhinal gyrus
nTPM: 40.7
1787 Male, age 76, left hemisphere 48.2
1938 Female, age 85, left hemisphere 40.6
2764 Male, age 80, right hemisphere 40.3
2686 Male, age 75, right hemisphere 40.0
2117 Female, age 91, right hemisphere 38.4
2613 Female, age 94, left hemisphere 36.7
Hippocampus, CA1
nTPM: 47.8
2045 Male, age 76, both hemispheres 76.0
2527 Male, age 74, both hemispheres 45.2
2749 Male, age 80, left hemisphere 43.3
1873 Female, age 85, both hemispheres 39.6
2082 Female, age 91, right hemisphere 34.7
Hippocampus, CA2
nTPM: 50.8
2249 Male, age 74, both hemispheres 90.7
1892 Male, age 76, both hemispheres 68.5
2437 Female, age 94, left hemisphere 51.4
1940 Female, age 85, left hemisphere 34.2
1963 Male, age 80, left hemisphere 30.3
2113 Female, age 91, right hemisphere 29.7
Hippocampus, CA3
nTPM: 121.8
2436 Male, age 74, both hemispheres 371.6
2620 Female, age 94, left hemisphere 139.9
1867 Male, age 76, both hemispheres 78.8
1891 Female, age 85, both hemispheres 54.9
2861 Female, age 67, both hemispheres 52.4
2137 Male, age 80, left hemisphere 33.0
Parahippocampal cortex
nTPM: 40.4
1990 Female, age 91, right hemisphere 53.2
1933 Female, age 85, both hemispheres 47.1
1850 Male, age 80, both hemispheres 46.2
2250 Female, age 67, right hemisphere 40.6
2622 Female, age 67, right hemisphere 40.6
2692 Male, age 74, both hemispheres 38.6
2245 Female, age 91, both hemispheres 37.4
2693 Female, age 94, both hemispheres 35.0
2532 Female, age 72, left hemisphere 33.6
2018 Male, age 76, both hemispheres 31.4
Perirhinal gyrus
nTPM: 42.9
1847 Female, age 91, left hemisphere 63.9
1794 Male, age 80, right hemisphere 44.2
2521 Female, age 94, right hemisphere 40.4
2848 Male, age 76, right hemisphere 33.1
1841 Female, age 85, right hemisphere 33.0
Subiculum
nTPM: 53.1
2438 Female, age 94, left hemisphere 77.9
1901 Male, age 80, both hemispheres 61.3
1977 Female, age 85, both hemispheres 51.8
2619 Male, age 74, both hemispheres 49.9
2729 Female, age 91, right hemisphere 48.4
2042 Male, age 76, both hemispheres 29.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.8
Samples: 197

Max nTPM: 640.3
Min nTPM: 9.0
Std nTPM: 93.8
Median nTPM: 45.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 640.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 605.2
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 423.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 415.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 374.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 360.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 350.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 307.8
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 302.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 272.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 238.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.1
FF:10169-103B7 60 years, female 84.7
FF:10153-102I9 76 years, female 65.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.5
Samples: 4

Max nTPM: 176.1
Min nTPM: 15.1
Sample A Female 31.3
Sample B Female 15.1
Sample C Male 176.1
Sample D Male 19.5
Entorhinal cortex
nTPM: 86.4
Samples: 4

Max nTPM: 129.0
Min nTPM: 40.5
Sample A Female 79.3
Sample B Female 129.0
Sample C Male 40.5
Sample D Male 96.8
Subiculum
nTPM: 69.6
Samples: 4

Max nTPM: 147.6
Min nTPM: 29.7
Sample A Female 147.6
Sample B Female 46.3
Sample C Male 29.7
Sample D Male 54.9
Ventral hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 44.0
Min nTPM: 10.0
Sample A Female 14.1
Sample B Female 22.8
Sample C Male 44.0
Sample D Male 10.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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