HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:105.1 nTPM
HPA:105.1 nTPM
GTEx:81.7 nTPM
FANTOM5:471.2 Scaled Tags Per Million
Pig:262.3 nTPM
Mouse:141.5 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.1
Sample id Sample description nTPM
Hippocampus
nTPM: 104.0
2529 Female, age 94, left hemisphere 108.3
1855 Male, age 76, left hemisphere 107.2
1898 Male, age 80, left hemisphere 103.9
1911 Female, age 85, right hemisphere 102.6
2621 Female, age 67, right hemisphere 101.1
2148 Female, age 91, left hemisphere 100.9
Dentate gyrus
nTPM: 96.0
2246 Female, age 85, both hemispheres 102.3
2528 Male, age 74, both hemispheres 102.3
2530 Female, age 94, left hemisphere 102.0
2010 Male, age 76, both hemispheres 96.9
2531 Female, age 67, both hemispheres 88.1
1927 Female, age 91, both hemispheres 84.3
Entorhinal gyrus
nTPM: 96.3
2117 Female, age 91, right hemisphere 122.5
1938 Female, age 85, left hemisphere 97.6
1787 Male, age 76, left hemisphere 97.2
2764 Male, age 80, right hemisphere 96.6
2686 Male, age 75, right hemisphere 83.7
2613 Female, age 94, left hemisphere 80.1
Hippocampus, CA1
nTPM: 96.6
2527 Male, age 74, both hemispheres 107.9
2749 Male, age 80, left hemisphere 94.7
1873 Female, age 85, both hemispheres 94.0
2045 Male, age 76, both hemispheres 93.3
2082 Female, age 91, right hemisphere 93.2
Hippocampus, CA2
nTPM: 96.3
2249 Male, age 74, both hemispheres 110.7
1940 Female, age 85, left hemisphere 98.4
2437 Female, age 94, left hemisphere 95.1
1892 Male, age 76, both hemispheres 94.6
2113 Female, age 91, right hemisphere 93.0
1963 Male, age 80, left hemisphere 86.1
Hippocampus, CA3
nTPM: 94.1
1891 Female, age 85, both hemispheres 108.5
2436 Male, age 74, both hemispheres 101.8
1867 Male, age 76, both hemispheres 97.6
2620 Female, age 94, left hemisphere 90.3
2137 Male, age 80, left hemisphere 84.9
2861 Female, age 67, both hemispheres 81.7
Parahippocampal cortex
nTPM: 92.8
2250 Female, age 67, right hemisphere 98.5
2245 Female, age 91, both hemispheres 97.2
1990 Female, age 91, right hemisphere 96.8
2532 Female, age 72, left hemisphere 96.6
2018 Male, age 76, both hemispheres 96.1
2692 Male, age 74, both hemispheres 94.9
1850 Male, age 80, both hemispheres 91.4
1933 Female, age 85, both hemispheres 87.0
2693 Female, age 94, both hemispheres 85.6
2622 Female, age 67, right hemisphere 84.0
Perirhinal gyrus
nTPM: 92.6
1794 Male, age 80, right hemisphere 94.1
1847 Female, age 91, left hemisphere 92.8
1841 Female, age 85, right hemisphere 92.4
2848 Male, age 76, right hemisphere 92.4
2521 Female, age 94, right hemisphere 91.3
Subiculum
nTPM: 105.1
2438 Female, age 94, left hemisphere 116.0
2042 Male, age 76, both hemispheres 114.5
2619 Male, age 74, both hemispheres 106.3
1901 Male, age 80, both hemispheres 103.3
1977 Female, age 85, both hemispheres 101.0
2729 Female, age 91, right hemisphere 89.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.7
Samples: 197

Max nTPM: 165.4
Min nTPM: 30.1
Std nTPM: 25.2
Median nTPM: 81.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 165.4
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 137.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 135.2
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 132.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 132.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 127.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 126.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 126.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 125.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 125.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 124.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 471.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 471.2
FF:10169-103B7 60 years, female 510.6
FF:10153-102I9 76 years, female 431.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 262.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 262.4
Samples: 4

Max nTPM: 347.0
Min nTPM: 186.8
Sample A Female 347.0
Sample B Female 228.3
Sample C Male 287.3
Sample D Male 186.8
Entorhinal cortex
nTPM: 210.5
Samples: 4

Max nTPM: 233.2
Min nTPM: 167.9
Sample A Female 216.6
Sample B Female 233.2
Sample C Male 224.4
Sample D Male 167.9
Subiculum
nTPM: 228.6
Samples: 4

Max nTPM: 286.1
Min nTPM: 198.2
Sample A Female 286.1
Sample B Female 222.8
Sample C Male 198.2
Sample D Male 207.4
Ventral hippocampus
nTPM: 232.4
Samples: 4

Max nTPM: 268.6
Min nTPM: 191.8
Sample A Female 224.9
Sample B Female 191.8
Sample C Male 268.6
Sample D Male 244.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 139.4
Samples: 4

Max nTPM: 147.6
Min nTPM: 128.5
Sample A Male 143.1
Sample B Male 138.5
Sample C Female 147.6
Sample D Female 128.5
Hippocampal formation
nTPM: 141.6
Samples: 4

Max nTPM: 147.1
Min nTPM: 133.3
Sample A Male 147.1
Sample B Male 133.3
Sample C Female 145.3
Sample D Female 140.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69080518 Antisense, RP_050324_02_C07, Mouse strain C57BL/6J (56 days, male) 2.0

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