HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.6 nTPM
HPA:16.6 nTPM
GTEx:19.3 nTPM
FANTOM5:69.9 Scaled Tags Per Million
Mouse:87.0 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.6
Sample id Sample description nTPM
Hippocampus
nTPM: 13.1
1898 Male, age 80, left hemisphere 18.9
1855 Male, age 76, left hemisphere 12.6
1911 Female, age 85, right hemisphere 12.6
2621 Female, age 67, right hemisphere 12.3
2529 Female, age 94, left hemisphere 12.0
2148 Female, age 91, left hemisphere 10.2
Dentate gyrus
nTPM: 14.0
1927 Female, age 91, both hemispheres 17.5
2010 Male, age 76, both hemispheres 15.8
2530 Female, age 94, left hemisphere 14.7
2246 Female, age 85, both hemispheres 13.0
2528 Male, age 74, both hemispheres 12.3
2531 Female, age 67, both hemispheres 10.8
Entorhinal gyrus
nTPM: 13.6
2764 Male, age 80, right hemisphere 15.3
1938 Female, age 85, left hemisphere 14.8
1787 Male, age 76, left hemisphere 14.5
2613 Female, age 94, left hemisphere 14.5
2117 Female, age 91, right hemisphere 12.6
2686 Male, age 75, right hemisphere 9.8
Hippocampus, CA1
nTPM: 16.5
2749 Male, age 80, left hemisphere 28.7
1873 Female, age 85, both hemispheres 14.9
2527 Male, age 74, both hemispheres 13.6
2045 Male, age 76, both hemispheres 13.1
2082 Female, age 91, right hemisphere 12.3
Hippocampus, CA2
nTPM: 15.4
1963 Male, age 80, left hemisphere 17.7
2437 Female, age 94, left hemisphere 17.2
2249 Male, age 74, both hemispheres 16.3
1892 Male, age 76, both hemispheres 15.5
1940 Female, age 85, left hemisphere 13.2
2113 Female, age 91, right hemisphere 12.4
Hippocampus, CA3
nTPM: 14.1
2137 Male, age 80, left hemisphere 22.6
1867 Male, age 76, both hemispheres 15.5
2436 Male, age 74, both hemispheres 14.6
2620 Female, age 94, left hemisphere 10.9
2861 Female, age 67, both hemispheres 10.5
1891 Female, age 85, both hemispheres 10.4
Parahippocampal cortex
nTPM: 13.7
2245 Female, age 91, both hemispheres 16.8
1850 Male, age 80, both hemispheres 15.5
1933 Female, age 85, both hemispheres 14.8
2693 Female, age 94, both hemispheres 14.8
2532 Female, age 72, left hemisphere 14.2
2250 Female, age 67, right hemisphere 14.1
1990 Female, age 91, right hemisphere 13.5
2018 Male, age 76, both hemispheres 11.6
2692 Male, age 74, both hemispheres 11.2
2622 Female, age 67, right hemisphere 10.2
Perirhinal gyrus
nTPM: 16.6
1794 Male, age 80, right hemisphere 19.6
1847 Female, age 91, left hemisphere 19.0
2521 Female, age 94, right hemisphere 16.0
1841 Female, age 85, right hemisphere 15.7
2848 Male, age 76, right hemisphere 12.8
Subiculum
nTPM: 13.5
1977 Female, age 85, both hemispheres 16.3
1901 Male, age 80, both hemispheres 15.1
2438 Female, age 94, left hemisphere 14.3
2042 Male, age 76, both hemispheres 13.1
2619 Male, age 74, both hemispheres 11.9
2729 Female, age 91, right hemisphere 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 56.1
Min nTPM: 6.3
Std nTPM: 6.5
Median nTPM: 18.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 39.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 33.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 30.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 30.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 30.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 30.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 30.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 29.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.9
FF:10169-103B7 60 years, female 96.2
FF:10153-102I9 76 years, female 43.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.2
Samples: 4

Max nTPM: 85.9
Min nTPM: 79.0
Sample A Male 79.0
Sample B Male 84.9
Sample C Female 85.9
Sample D Female 83.1
Hippocampal formation
nTPM: 87.0
Samples: 4

Max nTPM: 95.7
Min nTPM: 83.0
Sample A Male 95.7
Sample B Male 83.5
Sample C Female 85.6
Sample D Female 83.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
73521813 Antisense, RP_051101_03_A11, Mouse strain C57BL/6J (56 days, male) 5.1
69817217 Antisense, RP_050510_02_H06, Mouse strain C57BL/6J (56 days, male) 3.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.