HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:37.8 nTPM
HPA:37.8 nTPM
GTEx:23.7 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:154.2 nTPM
Mouse:56.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
2529 Female, age 94, left hemisphere 27.1
1911 Female, age 85, right hemisphere 15.7
2621 Female, age 67, right hemisphere 13.7
1898 Male, age 80, left hemisphere 12.0
1855 Male, age 76, left hemisphere 11.9
2148 Female, age 91, left hemisphere 10.2
Dentate gyrus
nTPM: 15.0
2530 Female, age 94, left hemisphere 27.8
2528 Male, age 74, both hemispheres 20.9
2246 Female, age 85, both hemispheres 15.4
2010 Male, age 76, both hemispheres 13.2
1927 Female, age 91, both hemispheres 7.3
2531 Female, age 67, both hemispheres 5.5
Entorhinal gyrus
nTPM: 35.7
1938 Female, age 85, left hemisphere 47.3
2117 Female, age 91, right hemisphere 46.0
2764 Male, age 80, right hemisphere 35.2
2686 Male, age 75, right hemisphere 30.9
2613 Female, age 94, left hemisphere 30.8
1787 Male, age 76, left hemisphere 23.9
Hippocampus, CA1
nTPM: 14.4
2527 Male, age 74, both hemispheres 26.7
2082 Female, age 91, right hemisphere 17.7
1873 Female, age 85, both hemispheres 16.7
2749 Male, age 80, left hemisphere 6.0
2045 Male, age 76, both hemispheres 4.9
Hippocampus, CA2
nTPM: 18.4
1963 Male, age 80, left hemisphere 24.1
2249 Male, age 74, both hemispheres 23.1
2113 Female, age 91, right hemisphere 17.3
2437 Female, age 94, left hemisphere 17.2
1892 Male, age 76, both hemispheres 16.7
1940 Female, age 85, left hemisphere 12.3
Hippocampus, CA3
nTPM: 6.6
1891 Female, age 85, both hemispheres 32.0
1867 Male, age 76, both hemispheres 8.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 29.1
2692 Male, age 74, both hemispheres 57.5
1850 Male, age 80, both hemispheres 44.6
1990 Female, age 91, right hemisphere 34.7
2532 Female, age 72, left hemisphere 34.3
1933 Female, age 85, both hemispheres 32.5
2622 Female, age 67, right hemisphere 26.0
2245 Female, age 91, both hemispheres 18.6
2693 Female, age 94, both hemispheres 18.2
2250 Female, age 67, right hemisphere 13.6
2018 Male, age 76, both hemispheres 11.2
Perirhinal gyrus
nTPM: 28.0
1794 Male, age 80, right hemisphere 30.8
2848 Male, age 76, right hemisphere 28.7
1841 Female, age 85, right hemisphere 27.5
1847 Female, age 91, left hemisphere 27.2
2521 Female, age 94, right hemisphere 25.8
Subiculum
nTPM: 37.8
2438 Female, age 94, left hemisphere 55.6
1977 Female, age 85, both hemispheres 45.0
2619 Male, age 74, both hemispheres 41.9
2042 Male, age 76, both hemispheres 33.9
1901 Male, age 80, both hemispheres 33.0
2729 Female, age 91, right hemisphere 17.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 50.1
Min nTPM: 7.2
Std nTPM: 8.4
Median nTPM: 22.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 50.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 48.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 47.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 47.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 47.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 45.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 44.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 44.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 42.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 42.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 41.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.8
FF:10153-102I9 76 years, female 61.0
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 154.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 154.3
Samples: 4

Max nTPM: 191.7
Min nTPM: 120.1
Sample A Female 168.4
Sample B Female 136.8
Sample C Male 191.7
Sample D Male 120.1
Entorhinal cortex
nTPM: 129.0
Samples: 4

Max nTPM: 151.2
Min nTPM: 110.9
Sample A Female 115.8
Sample B Female 151.2
Sample C Male 110.9
Sample D Male 138.1
Subiculum
nTPM: 128.4
Samples: 4

Max nTPM: 153.4
Min nTPM: 111.7
Sample A Female 153.4
Sample B Female 135.2
Sample C Male 111.7
Sample D Male 113.2
Ventral hippocampus
nTPM: 110.7
Samples: 4

Max nTPM: 130.8
Min nTPM: 76.8
Sample A Female 130.8
Sample B Female 117.6
Sample C Male 76.8
Sample D Male 117.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.3
Samples: 4

Max nTPM: 65.6
Min nTPM: 49.3
Sample A Male 54.7
Sample B Male 55.7
Sample C Female 49.3
Sample D Female 65.6
Hippocampal formation
nTPM: 46.6
Samples: 4

Max nTPM: 57.2
Min nTPM: 38.8
Sample A Male 38.8
Sample B Male 48.4
Sample C Female 57.2
Sample D Female 41.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
10 Antisense, RP_Baylor_103355, Mouse strain C57BL/6J (56 days, male) 0.7
71152431 Antisense, RP_050719_04_A03, Mouse strain C57BL/6J (56 days, male) 0.1

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