HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:62.0 nTPM
HPA:62.0 nTPM
GTEx:57.4 nTPM
FANTOM5:69.1 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:74.2 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054064
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.0
Sample id Sample description nTPM
Hippocampus
nTPM: 55.0
1898 Male, age 80, left hemisphere 61.7
1855 Male, age 76, left hemisphere 57.8
2148 Female, age 91, left hemisphere 53.9
2621 Female, age 67, right hemisphere 52.5
2529 Female, age 94, left hemisphere 52.4
1911 Female, age 85, right hemisphere 51.9
Dentate gyrus
nTPM: 55.3
1927 Female, age 91, both hemispheres 60.4
2010 Male, age 76, both hemispheres 58.2
2246 Female, age 85, both hemispheres 54.7
2528 Male, age 74, both hemispheres 54.7
2530 Female, age 94, left hemisphere 52.2
2531 Female, age 67, both hemispheres 51.5
Entorhinal gyrus
nTPM: 56.1
1938 Female, age 85, left hemisphere 59.8
2764 Male, age 80, right hemisphere 59.1
2613 Female, age 94, left hemisphere 56.9
1787 Male, age 76, left hemisphere 56.8
2117 Female, age 91, right hemisphere 52.1
2686 Male, age 75, right hemisphere 52.0
Hippocampus, CA1
nTPM: 57.4
2749 Male, age 80, left hemisphere 61.3
1873 Female, age 85, both hemispheres 59.8
2045 Male, age 76, both hemispheres 59.2
2082 Female, age 91, right hemisphere 53.5
2527 Male, age 74, both hemispheres 53.1
Hippocampus, CA2
nTPM: 56.3
1892 Male, age 76, both hemispheres 62.7
1963 Male, age 80, left hemisphere 59.2
1940 Female, age 85, left hemisphere 55.9
2249 Male, age 74, both hemispheres 54.8
2437 Female, age 94, left hemisphere 53.5
2113 Female, age 91, right hemisphere 51.8
Hippocampus, CA3
nTPM: 55.2
1867 Male, age 76, both hemispheres 58.7
2137 Male, age 80, left hemisphere 58.4
1891 Female, age 85, both hemispheres 55.5
2436 Male, age 74, both hemispheres 53.7
2620 Female, age 94, left hemisphere 53.1
2861 Female, age 67, both hemispheres 51.9
Parahippocampal cortex
nTPM: 55.8
1850 Male, age 80, both hemispheres 63.3
1933 Female, age 85, both hemispheres 59.8
1990 Female, age 91, right hemisphere 58.5
2250 Female, age 67, right hemisphere 56.3
2693 Female, age 94, both hemispheres 56.3
2018 Male, age 76, both hemispheres 54.8
2245 Female, age 91, both hemispheres 54.1
2532 Female, age 72, left hemisphere 54.0
2692 Male, age 74, both hemispheres 51.9
2622 Female, age 67, right hemisphere 49.2
Perirhinal gyrus
nTPM: 62.0
1847 Female, age 91, left hemisphere 66.5
1841 Female, age 85, right hemisphere 64.0
1794 Male, age 80, right hemisphere 62.6
2848 Male, age 76, right hemisphere 60.0
2521 Female, age 94, right hemisphere 56.8
Subiculum
nTPM: 54.3
1977 Female, age 85, both hemispheres 58.4
1901 Male, age 80, both hemispheres 57.2
2438 Female, age 94, left hemisphere 53.3
2619 Male, age 74, both hemispheres 52.7
2729 Female, age 91, right hemisphere 52.3
2042 Male, age 76, both hemispheres 51.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.4
Samples: 197

Max nTPM: 140.7
Min nTPM: 25.0
Std nTPM: 21.3
Median nTPM: 53.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 140.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 134.9
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 127.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 120.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 106.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 104.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 104.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 103.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 102.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 95.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 94.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.1
FF:10169-103B7 60 years, female 94.1
FF:10153-102I9 76 years, female 44.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.1
Sample A Female 15.3
Sample B Female 12.5
Sample C Male 11.2
Sample D Male 10.1
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.6
Sample A Female 12.1
Sample B Female 12.5
Sample C Male 11.6
Sample D Male 10.6
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.1
Sample A Female 12.5
Sample B Female 11.0
Sample C Male 10.1
Sample D Male 10.1
Ventral hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 16.8
Min nTPM: 10.4
Sample A Female 16.8
Sample B Female 10.6
Sample C Male 14.3
Sample D Male 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.5
Samples: 4

Max nTPM: 84.5
Min nTPM: 68.5
Sample A Male 68.5
Sample B Male 84.5
Sample C Female 69.5
Sample D Female 71.4
Hippocampal formation
nTPM: 74.2
Samples: 4

Max nTPM: 80.9
Min nTPM: 65.6
Sample A Male 79.5
Sample B Male 70.6
Sample C Female 65.6
Sample D Female 80.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
83167 Antisense, RP_040407_01_H02, Mouse strain C57BL/6J (56 days, male) 9.2
72713 Antisense, RP_040407_01_H02, Mouse strain C57BL/6J (56 days, male) 9.1
77620389 Antisense, RP_070205_01_E11, Mouse strain C57BL/6J (56 days, male) 1.5
77414123 Antisense, RP_070205_01_E11, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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