HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.3 nTPM
HPA:18.3 nTPM
GTEx:15.9 nTPM
FANTOM5:49.3 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:37.6 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.3
1898 Male, age 80, left hemisphere 20.9
1855 Male, age 76, left hemisphere 19.0
2529 Female, age 94, left hemisphere 18.3
2148 Female, age 91, left hemisphere 17.2
2621 Female, age 67, right hemisphere 17.2
1911 Female, age 85, right hemisphere 16.9
Dentate gyrus
nTPM: 17.4
2010 Male, age 76, both hemispheres 19.2
1927 Female, age 91, both hemispheres 17.9
2528 Male, age 74, both hemispheres 17.9
2530 Female, age 94, left hemisphere 17.4
2246 Female, age 85, both hemispheres 16.6
2531 Female, age 67, both hemispheres 15.6
Entorhinal gyrus
nTPM: 16.3
2117 Female, age 91, right hemisphere 20.0
1938 Female, age 85, left hemisphere 17.3
1787 Male, age 76, left hemisphere 17.2
2686 Male, age 75, right hemisphere 15.4
2764 Male, age 80, right hemisphere 15.2
2613 Female, age 94, left hemisphere 12.8
Hippocampus, CA1
nTPM: 17.5
2749 Male, age 80, left hemisphere 19.8
2527 Male, age 74, both hemispheres 19.7
1873 Female, age 85, both hemispheres 18.3
2045 Male, age 76, both hemispheres 15.4
2082 Female, age 91, right hemisphere 14.5
Hippocampus, CA2
nTPM: 16.9
1963 Male, age 80, left hemisphere 18.1
2249 Male, age 74, both hemispheres 17.9
1892 Male, age 76, both hemispheres 16.7
2113 Female, age 91, right hemisphere 16.6
2437 Female, age 94, left hemisphere 16.4
1940 Female, age 85, left hemisphere 15.8
Hippocampus, CA3
nTPM: 16.4
2436 Male, age 74, both hemispheres 19.2
1891 Female, age 85, both hemispheres 18.1
1867 Male, age 76, both hemispheres 16.5
2137 Male, age 80, left hemisphere 16.5
2620 Female, age 94, left hemisphere 14.6
2861 Female, age 67, both hemispheres 13.2
Parahippocampal cortex
nTPM: 17.4
2692 Male, age 74, both hemispheres 19.8
1850 Male, age 80, both hemispheres 19.4
2250 Female, age 67, right hemisphere 18.0
2018 Male, age 76, both hemispheres 17.8
1990 Female, age 91, right hemisphere 17.1
2245 Female, age 91, both hemispheres 17.0
2693 Female, age 94, both hemispheres 16.8
2532 Female, age 72, left hemisphere 16.2
1933 Female, age 85, both hemispheres 16.0
2622 Female, age 67, right hemisphere 15.9
Perirhinal gyrus
nTPM: 17.4
1794 Male, age 80, right hemisphere 18.8
1847 Female, age 91, left hemisphere 18.3
2848 Male, age 76, right hemisphere 17.5
1841 Female, age 85, right hemisphere 17.0
2521 Female, age 94, right hemisphere 15.6
Subiculum
nTPM: 18.3
2619 Male, age 74, both hemispheres 19.2
2438 Female, age 94, left hemisphere 18.7
2729 Female, age 91, right hemisphere 18.3
1977 Female, age 85, both hemispheres 18.0
1901 Male, age 80, both hemispheres 17.9
2042 Male, age 76, both hemispheres 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 29.3
Min nTPM: 11.5
Std nTPM: 2.4
Median nTPM: 15.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 24.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 21.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 21.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 20.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 20.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 19.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 19.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 19.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.3
FF:10153-102I9 76 years, female 53.6
FF:10169-103B7 60 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 29.2
Min nTPM: 23.2
Sample A Female 29.2
Sample B Female 24.7
Sample C Male 27.2
Sample D Male 23.2
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 30.3
Min nTPM: 21.5
Sample A Female 24.6
Sample B Female 30.3
Sample C Male 26.5
Sample D Male 21.5
Subiculum
nTPM: 25.1
Samples: 4

Max nTPM: 29.7
Min nTPM: 23.0
Sample A Female 29.7
Sample B Female 23.0
Sample C Male 23.8
Sample D Male 23.7
Ventral hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 26.9
Min nTPM: 22.4
Sample A Female 26.9
Sample B Female 22.4
Sample C Male 25.2
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.6
Samples: 4

Max nTPM: 42.4
Min nTPM: 31.6
Sample A Male 31.6
Sample B Male 42.4
Sample C Female 38.6
Sample D Female 37.6
Hippocampal formation
nTPM: 34.1
Samples: 4

Max nTPM: 36.2
Min nTPM: 30.2
Sample A Male 36.2
Sample B Male 36.2
Sample C Female 33.6
Sample D Female 30.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
70195060 Antisense, RP_050517_02_C08, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

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