HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.3 nTPM
HPA:21.3 nTPM
GTEx:18.6 nTPM
FANTOM5:77.3 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:52.7 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003332
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.3
Sample id Sample description nTPM
Hippocampus
nTPM: 20.7
2621 Female, age 67, right hemisphere 22.3
1898 Male, age 80, left hemisphere 21.0
2148 Female, age 91, left hemisphere 20.6
1855 Male, age 76, left hemisphere 20.5
2529 Female, age 94, left hemisphere 20.4
1911 Female, age 85, right hemisphere 19.7
Dentate gyrus
nTPM: 20.4
2530 Female, age 94, left hemisphere 23.5
2246 Female, age 85, both hemispheres 20.8
2528 Male, age 74, both hemispheres 20.8
1927 Female, age 91, both hemispheres 19.5
2010 Male, age 76, both hemispheres 19.4
2531 Female, age 67, both hemispheres 18.4
Entorhinal gyrus
nTPM: 20.3
2764 Male, age 80, right hemisphere 21.8
1938 Female, age 85, left hemisphere 21.3
1787 Male, age 76, left hemisphere 20.3
2117 Female, age 91, right hemisphere 20.1
2613 Female, age 94, left hemisphere 19.3
2686 Male, age 75, right hemisphere 18.7
Hippocampus, CA1
nTPM: 21.3
2749 Male, age 80, left hemisphere 25.1
2527 Male, age 74, both hemispheres 21.1
1873 Female, age 85, both hemispheres 20.5
2082 Female, age 91, right hemisphere 19.9
2045 Male, age 76, both hemispheres 19.8
Hippocampus, CA2
nTPM: 20.7
1963 Male, age 80, left hemisphere 23.6
1892 Male, age 76, both hemispheres 21.5
2249 Male, age 74, both hemispheres 20.8
1940 Female, age 85, left hemisphere 20.0
2113 Female, age 91, right hemisphere 19.4
2437 Female, age 94, left hemisphere 18.9
Hippocampus, CA3
nTPM: 20.6
2137 Male, age 80, left hemisphere 22.7
1867 Male, age 76, both hemispheres 21.2
2620 Female, age 94, left hemisphere 21.2
2436 Male, age 74, both hemispheres 19.8
1891 Female, age 85, both hemispheres 19.7
2861 Female, age 67, both hemispheres 19.2
Parahippocampal cortex
nTPM: 20.1
2532 Female, age 72, left hemisphere 21.7
1850 Male, age 80, both hemispheres 21.2
1933 Female, age 85, both hemispheres 20.6
2245 Female, age 91, both hemispheres 19.9
2692 Male, age 74, both hemispheres 19.9
2018 Male, age 76, both hemispheres 19.8
2250 Female, age 67, right hemisphere 19.7
1990 Female, age 91, right hemisphere 19.6
2693 Female, age 94, both hemispheres 19.5
2622 Female, age 67, right hemisphere 18.9
Perirhinal gyrus
nTPM: 20.8
1794 Male, age 80, right hemisphere 22.2
2521 Female, age 94, right hemisphere 21.2
1841 Female, age 85, right hemisphere 20.7
1847 Female, age 91, left hemisphere 19.9
2848 Male, age 76, right hemisphere 19.9
Subiculum
nTPM: 20.4
1901 Male, age 80, both hemispheres 21.8
2619 Male, age 74, both hemispheres 21.8
1977 Female, age 85, both hemispheres 21.7
2042 Male, age 76, both hemispheres 20.3
2438 Female, age 94, left hemisphere 19.0
2729 Female, age 91, right hemisphere 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.6
Samples: 197

Max nTPM: 35.0
Min nTPM: 9.9
Std nTPM: 4.7
Median nTPM: 17.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 35.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 31.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 31.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 30.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 30.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 29.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 29.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 28.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 28.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 27.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.3
FF:10153-102I9 76 years, female 81.3
FF:10169-103B7 60 years, female 73.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.3
Sample A Female 11.1
Sample B Female 8.7
Sample C Male 8.7
Sample D Male 7.3
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.7
Sample A Female 11.1
Sample B Female 11.8
Sample C Male 10.1
Sample D Male 8.7
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 12.1
Min nTPM: 7.7
Sample A Female 12.1
Sample B Female 8.5
Sample C Male 7.7
Sample D Male 8.0
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.1
Sample A Female 9.0
Sample B Female 7.1
Sample C Male 10.7
Sample D Male 9.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.6
Samples: 4

Max nTPM: 40.3
Min nTPM: 29.3
Sample A Male 31.3
Sample B Male 29.3
Sample C Female 40.3
Sample D Female 33.6
Hippocampal formation
nTPM: 52.7
Samples: 4

Max nTPM: 65.0
Min nTPM: 45.6
Sample A Male 45.6
Sample B Male 50.6
Sample C Female 65.0
Sample D Female 49.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
1547 Antisense, RP_Baylor_103093, Mouse strain C57BL/6J (56 days, male) 0.8
1548 Antisense, RP_Baylor_103093, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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