HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.1 nTPM
HPA:12.1 nTPM
GTEx:11.1 nTPM
FANTOM5:28.1 Scaled Tags Per Million
Pig:8.9 nTPM
Mouse:18.5 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
1855 Male, age 76, left hemisphere 12.9
2529 Female, age 94, left hemisphere 12.9
1911 Female, age 85, right hemisphere 9.5
2621 Female, age 67, right hemisphere 8.4
2148 Female, age 91, left hemisphere 7.7
1898 Male, age 80, left hemisphere 7.1
Dentate gyrus
nTPM: 8.7
2530 Female, age 94, left hemisphere 10.9
2246 Female, age 85, both hemispheres 10.8
2528 Male, age 74, both hemispheres 9.9
2010 Male, age 76, both hemispheres 8.4
2531 Female, age 67, both hemispheres 7.7
1927 Female, age 91, both hemispheres 4.4
Entorhinal gyrus
nTPM: 11.0
2117 Female, age 91, right hemisphere 12.7
2613 Female, age 94, left hemisphere 10.9
2686 Male, age 75, right hemisphere 10.9
2764 Male, age 80, right hemisphere 10.7
1938 Female, age 85, left hemisphere 10.6
1787 Male, age 76, left hemisphere 10.2
Hippocampus, CA1
nTPM: 7.8
2527 Male, age 74, both hemispheres 13.3
1873 Female, age 85, both hemispheres 7.7
2082 Female, age 91, right hemisphere 7.7
2045 Male, age 76, both hemispheres 7.4
2749 Male, age 80, left hemisphere 2.8
Hippocampus, CA2
nTPM: 9.0
2437 Female, age 94, left hemisphere 12.5
2249 Male, age 74, both hemispheres 10.8
1940 Female, age 85, left hemisphere 8.8
1892 Male, age 76, both hemispheres 8.6
1963 Male, age 80, left hemisphere 6.7
2113 Female, age 91, right hemisphere 6.4
Hippocampus, CA3
nTPM: 8.9
2620 Female, age 94, left hemisphere 14.8
2861 Female, age 67, both hemispheres 12.2
1891 Female, age 85, both hemispheres 9.2
2436 Male, age 74, both hemispheres 7.0
1867 Male, age 76, both hemispheres 6.3
2137 Male, age 80, left hemisphere 3.8
Parahippocampal cortex
nTPM: 10.1
2692 Male, age 74, both hemispheres 17.6
2622 Female, age 67, right hemisphere 14.1
2693 Female, age 94, both hemispheres 11.8
2532 Female, age 72, left hemisphere 10.6
1933 Female, age 85, both hemispheres 9.8
2250 Female, age 67, right hemisphere 8.5
1990 Female, age 91, right hemisphere 7.9
1850 Male, age 80, both hemispheres 7.3
2018 Male, age 76, both hemispheres 6.6
2245 Female, age 91, both hemispheres 6.2
Perirhinal gyrus
nTPM: 6.9
2521 Female, age 94, right hemisphere 10.2
2848 Male, age 76, right hemisphere 7.5
1794 Male, age 80, right hemisphere 6.3
1841 Female, age 85, right hemisphere 5.9
1847 Female, age 91, left hemisphere 4.4
Subiculum
nTPM: 12.1
2438 Female, age 94, left hemisphere 16.6
2619 Male, age 74, both hemispheres 15.6
2042 Male, age 76, both hemispheres 11.3
1977 Female, age 85, both hemispheres 10.3
1901 Male, age 80, both hemispheres 9.8
2729 Female, age 91, right hemisphere 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 28.9
Min nTPM: 2.0
Std nTPM: 4.8
Median nTPM: 10.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 28.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 27.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 24.6
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 24.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 22.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 21.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 21.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 21.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.1
FF:10153-102I9 76 years, female 34.3
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.6
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.3
Sample A Female 5.5
Sample B Female 4.5
Sample C Male 5.0
Sample D Male 3.3
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.9
Sample A Female 9.2
Sample B Female 7.9
Sample C Male 9.4
Sample D Male 9.2
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 11.5
Min nTPM: 6.2
Sample A Female 11.5
Sample B Female 7.3
Sample C Male 9.3
Sample D Male 6.2
Ventral hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 9.0
Min nTPM: 3.5
Sample A Female 4.9
Sample B Female 4.7
Sample C Male 9.0
Sample D Male 3.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 22.9
Min nTPM: 16.0
Sample A Male 18.3
Sample B Male 16.0
Sample C Female 16.9
Sample D Female 22.9
Hippocampal formation
nTPM: 17.9
Samples: 4

Max nTPM: 20.3
Min nTPM: 14.4
Sample A Male 14.4
Sample B Male 20.3
Sample C Female 19.9
Sample D Female 16.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
70302228 Antisense, RP_050607_03_H04, Mouse strain C57BL/6J (56 days, male) 3.2
74047717 Antisense, RP_051214_01_G12, Mouse strain C57BL/6J (56 days, male) 1.7

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