HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.7 nTPM
HPA:22.7 nTPM
GTEx:14.8 nTPM
FANTOM5:18.3 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:29.4 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.7
Sample id Sample description nTPM
Hippocampus
nTPM: 22.7
2529 Female, age 94, left hemisphere 23.9
1898 Male, age 80, left hemisphere 23.4
1855 Male, age 76, left hemisphere 23.1
1911 Female, age 85, right hemisphere 22.6
2621 Female, age 67, right hemisphere 22.1
2148 Female, age 91, left hemisphere 21.3
Dentate gyrus
nTPM: 22.4
2530 Female, age 94, left hemisphere 25.3
2010 Male, age 76, both hemispheres 22.6
2531 Female, age 67, both hemispheres 22.1
2528 Male, age 74, both hemispheres 22.0
2246 Female, age 85, both hemispheres 21.4
1927 Female, age 91, both hemispheres 20.8
Entorhinal gyrus
nTPM: 20.9
2117 Female, age 91, right hemisphere 22.3
2686 Male, age 75, right hemisphere 21.6
1787 Male, age 76, left hemisphere 21.0
2764 Male, age 80, right hemisphere 20.4
2613 Female, age 94, left hemisphere 20.3
1938 Female, age 85, left hemisphere 19.9
Hippocampus, CA1
nTPM: 21.4
2527 Male, age 74, both hemispheres 22.5
1873 Female, age 85, both hemispheres 21.9
2082 Female, age 91, right hemisphere 21.9
2045 Male, age 76, both hemispheres 20.9
2749 Male, age 80, left hemisphere 19.9
Hippocampus, CA2
nTPM: 22.5
2437 Female, age 94, left hemisphere 25.2
2249 Male, age 74, both hemispheres 23.0
1963 Male, age 80, left hemisphere 22.6
2113 Female, age 91, right hemisphere 22.0
1892 Male, age 76, both hemispheres 21.7
1940 Female, age 85, left hemisphere 20.5
Hippocampus, CA3
nTPM: 22.5
2861 Female, age 67, both hemispheres 25.2
1867 Male, age 76, both hemispheres 23.8
2436 Male, age 74, both hemispheres 22.7
1891 Female, age 85, both hemispheres 21.5
2620 Female, age 94, left hemisphere 21.2
2137 Male, age 80, left hemisphere 21.0
Parahippocampal cortex
nTPM: 21.0
2018 Male, age 76, both hemispheres 23.5
2692 Male, age 74, both hemispheres 21.4
2622 Female, age 67, right hemisphere 21.2
1990 Female, age 91, right hemisphere 20.9
2532 Female, age 72, left hemisphere 20.8
2245 Female, age 91, both hemispheres 20.7
2250 Female, age 67, right hemisphere 20.7
1850 Male, age 80, both hemispheres 20.6
1933 Female, age 85, both hemispheres 20.1
2693 Female, age 94, both hemispheres 20.0
Perirhinal gyrus
nTPM: 20.3
1841 Female, age 85, right hemisphere 21.1
1794 Male, age 80, right hemisphere 20.9
2521 Female, age 94, right hemisphere 20.3
1847 Female, age 91, left hemisphere 19.8
2848 Male, age 76, right hemisphere 19.3
Subiculum
nTPM: 22.2
2042 Male, age 76, both hemispheres 23.8
2438 Female, age 94, left hemisphere 23.0
2619 Male, age 74, both hemispheres 22.4
2729 Female, age 91, right hemisphere 22.3
1901 Male, age 80, both hemispheres 20.8
1977 Female, age 85, both hemispheres 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.8
Samples: 197

Max nTPM: 76.4
Min nTPM: 3.3
Std nTPM: 8.2
Median nTPM: 12.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 76.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 58.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 37.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 36.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 36.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 33.1
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 29.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 28.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 28.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 28.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.3
FF:10169-103B7 60 years, female 19.8
FF:10153-102I9 76 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 13.6
Min nTPM: 8.3
Sample A Female 13.6
Sample B Female 9.7
Sample C Male 12.4
Sample D Male 8.3
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.4
Sample A Female 9.2
Sample B Female 8.4
Sample C Male 8.0
Sample D Male 7.4
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.9
Sample A Female 8.5
Sample B Female 7.9
Sample C Male 8.1
Sample D Male 9.4
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 12.3
Min nTPM: 7.3
Sample A Female 10.2
Sample B Female 7.3
Sample C Male 12.3
Sample D Male 11.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 28.0
Min nTPM: 17.4
Sample A Male 21.9
Sample B Male 17.4
Sample C Female 28.0
Sample D Female 24.3
Hippocampal formation
nTPM: 29.4
Samples: 4

Max nTPM: 40.8
Min nTPM: 21.8
Sample A Male 21.8
Sample B Male 23.8
Sample C Female 31.2
Sample D Female 40.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
70565306 Antisense, RP_050623_04_F11, Mouse strain C57BL/6J (56 days, male) 1.0
71924389 Antisense, RP_050623_04_F11, Mouse strain C57BL/6J (56 days, male) 0.2

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