COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:48.7 nTPM
HPA:32.5 nTPM
GTEx:48.7 nTPM
FANTOM5:165.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 32.5
overview
Male, age 54 		Colon sample 67
nTPM: 33.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 40.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 32.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 30
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 45.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 43.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 43.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 24
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 21.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 27.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 25.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 28
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 27.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 48.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 34.4
Samples: 373

Max nTPM: 86.6
Min nTPM: 19.3
Std nTPM: 8.3
Median nTPM: 32.5
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 86.6
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 81.0
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 76.3
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 75.6
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 74.2
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 68.4
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 59.7
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 59.6
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 52.7
GTEX-Y8LW-1126-SM-4VDS4 50-59 years, female 51.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 50.8
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Colon - Transverse
Average nTPM: 48.7
Samples: 406

Max nTPM: 120.2
Min nTPM: 24.1
Std nTPM: 15.5
Median nTPM: 47.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 120.2
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 96.6
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 94.2
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 89.8
GTEX-14PK6-1726-SM-6871J 70-79 years, female 89.3
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 88.6
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 83.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 80.9
GTEX-ZLWG-1726-SM-DNZZ2 50-59 years, female 80.5
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 79.6
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 79.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 165.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 165.2
FF:10014-101C5 62,83,84 years, mixed 165.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.