HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.3 nTPM
HPA:40.3 nTPM
GTEx:60.2 nTPM
FANTOM5:22.2 Scaled Tags Per Million
Pig:5.8 nTPM
Mouse:3.8 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA078265
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.3
Sample id Sample description nTPM
Hippocampus
nTPM: 39.1
2621 Female, age 67, right hemisphere 43.0
1855 Male, age 76, left hemisphere 40.4
1911 Female, age 85, right hemisphere 39.5
2529 Female, age 94, left hemisphere 38.8
2148 Female, age 91, left hemisphere 36.5
1898 Male, age 80, left hemisphere 36.4
Dentate gyrus
nTPM: 37.4
2530 Female, age 94, left hemisphere 40.0
2531 Female, age 67, both hemispheres 38.1
2010 Male, age 76, both hemispheres 37.8
2246 Female, age 85, both hemispheres 36.5
2528 Male, age 74, both hemispheres 36.4
1927 Female, age 91, both hemispheres 35.6
Entorhinal gyrus
nTPM: 36.0
2686 Male, age 75, right hemisphere 40.3
2613 Female, age 94, left hemisphere 35.6
2117 Female, age 91, right hemisphere 35.4
1938 Female, age 85, left hemisphere 35.1
2764 Male, age 80, right hemisphere 35.1
1787 Male, age 76, left hemisphere 34.8
Hippocampus, CA1
nTPM: 40.3
2527 Male, age 74, both hemispheres 42.8
2045 Male, age 76, both hemispheres 41.8
2749 Male, age 80, left hemisphere 41.3
2082 Female, age 91, right hemisphere 39.0
1873 Female, age 85, both hemispheres 36.8
Hippocampus, CA2
nTPM: 38.8
2249 Male, age 74, both hemispheres 42.3
2113 Female, age 91, right hemisphere 39.4
2437 Female, age 94, left hemisphere 39.4
1892 Male, age 76, both hemispheres 38.9
1963 Male, age 80, left hemisphere 36.8
1940 Female, age 85, left hemisphere 36.1
Hippocampus, CA3
nTPM: 39.7
1867 Male, age 76, both hemispheres 44.4
2861 Female, age 67, both hemispheres 40.9
2137 Male, age 80, left hemisphere 39.8
2620 Female, age 94, left hemisphere 38.7
2436 Male, age 74, both hemispheres 37.9
1891 Female, age 85, both hemispheres 36.7
Parahippocampal cortex
nTPM: 37.8
2018 Male, age 76, both hemispheres 46.1
2622 Female, age 67, right hemisphere 40.4
2245 Female, age 91, both hemispheres 39.5
2692 Male, age 74, both hemispheres 37.6
2532 Female, age 72, left hemisphere 37.5
2250 Female, age 67, right hemisphere 36.3
1990 Female, age 91, right hemisphere 35.7
1850 Male, age 80, both hemispheres 35.6
2693 Female, age 94, both hemispheres 34.8
1933 Female, age 85, both hemispheres 34.4
Perirhinal gyrus
nTPM: 35.3
1841 Female, age 85, right hemisphere 36.6
2521 Female, age 94, right hemisphere 36.3
1794 Male, age 80, right hemisphere 35.4
2848 Male, age 76, right hemisphere 35.1
1847 Female, age 91, left hemisphere 33.3
Subiculum
nTPM: 38.3
2042 Male, age 76, both hemispheres 44.0
2438 Female, age 94, left hemisphere 40.4
2619 Male, age 74, both hemispheres 38.8
1901 Male, age 80, both hemispheres 37.3
2729 Female, age 91, right hemisphere 34.8
1977 Female, age 85, both hemispheres 34.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.2
Samples: 197

Max nTPM: 189.0
Min nTPM: 13.9
Std nTPM: 31.7
Median nTPM: 54.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 189.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 167.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 146.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 141.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 141.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 139.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 123.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 118.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 117.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 115.5
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 115.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.2
FF:10153-102I9 76 years, female 28.8
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 6.0
Min nTPM: 3.9
Sample A Female 3.9
Sample B Female 4.3
Sample C Male 4.6
Sample D Male 6.0
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.3
Sample A Female 4.4
Sample B Female 3.3
Sample C Male 4.9
Sample D Male 5.1
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 5.4
Min nTPM: 3.5
Sample A Female 5.4
Sample B Female 3.5
Sample C Male 5.2
Sample D Male 3.5
Ventral hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 8.0
Min nTPM: 4.5
Sample A Female 5.7
Sample B Female 4.9
Sample C Male 8.0
Sample D Male 4.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.4
Sample A Male 4.8
Sample B Male 2.4
Sample C Female 4.1
Sample D Female 3.9
Hippocampal formation
nTPM: 3.8
Samples: 4

Max nTPM: 5.4
Min nTPM: 2.4
Sample A Male 3.8
Sample B Male 3.7
Sample C Female 2.4
Sample D Female 5.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
73716656 Antisense, RP_051206_03_E09, Mouse strain C57BL/6J (56 days, male) 0.9

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