HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.6 nTPM
HPA:37.6 nTPM
GTEx:36.3 nTPM
FANTOM5:46.9 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:61.1 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030943Antibody HPA030944Antibody HPA030945Antibody CAB034184
Glial cells MediumMediumNot detectedLow
Neuronal cells MediumMediumLowMedium








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.6
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
1898 Male, age 80, left hemisphere 33.9
2148 Female, age 91, left hemisphere 27.8
1911 Female, age 85, right hemisphere 27.5
1855 Male, age 76, left hemisphere 27.4
2529 Female, age 94, left hemisphere 24.8
2621 Female, age 67, right hemisphere 24.2
Dentate gyrus
nTPM: 28.5
1927 Female, age 91, both hemispheres 33.8
2246 Female, age 85, both hemispheres 29.7
2010 Male, age 76, both hemispheres 28.4
2528 Male, age 74, both hemispheres 27.6
2531 Female, age 67, both hemispheres 26.2
2530 Female, age 94, left hemisphere 25.5
Entorhinal gyrus
nTPM: 29.2
1938 Female, age 85, left hemisphere 35.6
2613 Female, age 94, left hemisphere 31.2
2764 Male, age 80, right hemisphere 29.0
1787 Male, age 76, left hemisphere 27.8
2686 Male, age 75, right hemisphere 25.9
2117 Female, age 91, right hemisphere 25.8
Hippocampus, CA1
nTPM: 29.8
2749 Male, age 80, left hemisphere 37.0
1873 Female, age 85, both hemispheres 32.9
2045 Male, age 76, both hemispheres 28.7
2527 Male, age 74, both hemispheres 26.2
2082 Female, age 91, right hemisphere 24.4
Hippocampus, CA2
nTPM: 27.3
1892 Male, age 76, both hemispheres 33.3
1963 Male, age 80, left hemisphere 32.3
2113 Female, age 91, right hemisphere 25.8
1940 Female, age 85, left hemisphere 25.6
2249 Male, age 74, both hemispheres 24.2
2437 Female, age 94, left hemisphere 22.8
Hippocampus, CA3
nTPM: 28.6
2137 Male, age 80, left hemisphere 36.2
1891 Female, age 85, both hemispheres 30.1
1867 Male, age 76, both hemispheres 29.2
2620 Female, age 94, left hemisphere 27.6
2436 Male, age 74, both hemispheres 26.2
2861 Female, age 67, both hemispheres 22.2
Parahippocampal cortex
nTPM: 30.4
1850 Male, age 80, both hemispheres 40.8
1933 Female, age 85, both hemispheres 35.2
2693 Female, age 94, both hemispheres 34.1
1990 Female, age 91, right hemisphere 30.8
2250 Female, age 67, right hemisphere 30.6
2532 Female, age 72, left hemisphere 28.8
2245 Female, age 91, both hemispheres 28.0
2018 Male, age 76, both hemispheres 26.7
2692 Male, age 74, both hemispheres 25.6
2622 Female, age 67, right hemisphere 23.2
Perirhinal gyrus
nTPM: 37.6
1841 Female, age 85, right hemisphere 43.0
1847 Female, age 91, left hemisphere 38.9
1794 Male, age 80, right hemisphere 37.9
2848 Male, age 76, right hemisphere 34.3
2521 Female, age 94, right hemisphere 33.8
Subiculum
nTPM: 26.0
1977 Female, age 85, both hemispheres 32.9
1901 Male, age 80, both hemispheres 29.0
2729 Female, age 91, right hemisphere 28.3
2042 Male, age 76, both hemispheres 22.9
2438 Female, age 94, left hemisphere 22.2
2619 Male, age 74, both hemispheres 21.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.3
Samples: 197

Max nTPM: 76.7
Min nTPM: 12.2
Std nTPM: 16.3
Median nTPM: 34.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 76.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 75.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 74.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 74.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 72.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 71.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 71.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 70.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 69.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 68.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.9
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 33.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 30.6
Min nTPM: 24.5
Sample A Female 30.6
Sample B Female 26.1
Sample C Male 26.6
Sample D Male 24.5
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 27.3
Min nTPM: 23.4
Sample A Female 25.2
Sample B Female 27.3
Sample C Male 23.4
Sample D Male 24.9
Subiculum
nTPM: 25.5
Samples: 4

Max nTPM: 30.4
Min nTPM: 22.8
Sample A Female 30.4
Sample B Female 22.8
Sample C Male 23.7
Sample D Male 24.9
Ventral hippocampus
nTPM: 25.2
Samples: 4

Max nTPM: 27.2
Min nTPM: 22.1
Sample A Female 27.2
Sample B Female 22.1
Sample C Male 24.4
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.1
Samples: 4

Max nTPM: 67.8
Min nTPM: 56.7
Sample A Male 61.2
Sample B Male 67.8
Sample C Female 58.7
Sample D Female 56.7
Hippocampal formation
nTPM: 58.0
Samples: 4

Max nTPM: 62.1
Min nTPM: 54.2
Sample A Male 57.0
Sample B Male 58.6
Sample C Female 62.1
Sample D Female 54.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
1110 Antisense, RP_Baylor_103310, Mouse strain C57BL/6J (56 days, male) 3.6
1109 Antisense, RP_Baylor_103310, Mouse strain C57BL/6J (56 days, male) 3.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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