HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:28.8 nTPM
HPA:28.8 nTPM
GTEx:39.3 nTPM
FANTOM5:113.3 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:90.9 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.2
1898 Male, age 80, left hemisphere 26.5
2621 Female, age 67, right hemisphere 18.8
1855 Male, age 76, left hemisphere 17.4
1911 Female, age 85, right hemisphere 12.2
2148 Female, age 91, left hemisphere 12.2
2529 Female, age 94, left hemisphere 10.1
Dentate gyrus
nTPM: 17.4
1927 Female, age 91, both hemispheres 28.9
2010 Male, age 76, both hemispheres 21.1
2246 Female, age 85, both hemispheres 16.1
2530 Female, age 94, left hemisphere 13.3
2528 Male, age 74, both hemispheres 12.8
2531 Female, age 67, both hemispheres 12.3
Entorhinal gyrus
nTPM: 16.7
1938 Female, age 85, left hemisphere 22.9
2613 Female, age 94, left hemisphere 20.9
2764 Male, age 80, right hemisphere 20.1
1787 Male, age 76, left hemisphere 17.5
2686 Male, age 75, right hemisphere 11.8
2117 Female, age 91, right hemisphere 7.0
Hippocampus, CA1
nTPM: 21.9
2749 Male, age 80, left hemisphere 39.6
1873 Female, age 85, both hemispheres 22.7
2045 Male, age 76, both hemispheres 17.9
2527 Male, age 74, both hemispheres 16.4
2082 Female, age 91, right hemisphere 12.7
Hippocampus, CA2
nTPM: 20.0
1892 Male, age 76, both hemispheres 39.3
1963 Male, age 80, left hemisphere 22.6
2249 Male, age 74, both hemispheres 16.4
1940 Female, age 85, left hemisphere 15.3
2437 Female, age 94, left hemisphere 13.5
2113 Female, age 91, right hemisphere 12.8
Hippocampus, CA3
nTPM: 20.1
1867 Male, age 76, both hemispheres 30.1
2137 Male, age 80, left hemisphere 21.8
2620 Female, age 94, left hemisphere 21.3
2436 Male, age 74, both hemispheres 16.4
1891 Female, age 85, both hemispheres 15.7
2861 Female, age 67, both hemispheres 15.2
Parahippocampal cortex
nTPM: 20.7
1850 Male, age 80, both hemispheres 26.7
1990 Female, age 91, right hemisphere 25.6
2245 Female, age 91, both hemispheres 25.0
1933 Female, age 85, both hemispheres 22.4
2250 Female, age 67, right hemisphere 22.3
2532 Female, age 72, left hemisphere 22.1
2693 Female, age 94, both hemispheres 20.9
2622 Female, age 67, right hemisphere 16.1
2018 Male, age 76, both hemispheres 14.3
2692 Male, age 74, both hemispheres 11.9
Perirhinal gyrus
nTPM: 28.8
1847 Female, age 91, left hemisphere 37.0
1841 Female, age 85, right hemisphere 31.2
1794 Male, age 80, right hemisphere 27.5
2521 Female, age 94, right hemisphere 27.2
2848 Male, age 76, right hemisphere 21.1
Subiculum
nTPM: 14.1
1977 Female, age 85, both hemispheres 22.0
1901 Male, age 80, both hemispheres 18.0
2619 Male, age 74, both hemispheres 12.9
2438 Female, age 94, left hemisphere 12.3
2042 Male, age 76, both hemispheres 11.8
2729 Female, age 91, right hemisphere 7.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.3
Samples: 197

Max nTPM: 131.5
Min nTPM: 4.9
Std nTPM: 26.1
Median nTPM: 34.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 131.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 129.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 104.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 104.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 100.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 97.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 95.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 92.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 89.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 88.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 87.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.3
FF:10169-103B7 60 years, female 152.7
FF:10153-102I9 76 years, female 73.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 12.0
Sample A Female 21.1
Sample B Female 18.5
Sample C Male 19.5
Sample D Male 12.0
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 22.2
Min nTPM: 14.9
Sample A Female 20.4
Sample B Female 22.2
Sample C Male 14.9
Sample D Male 15.6
Subiculum
nTPM: 15.6
Samples: 4

Max nTPM: 20.6
Min nTPM: 13.1
Sample A Female 20.6
Sample B Female 13.9
Sample C Male 14.8
Sample D Male 13.1
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 19.9
Min nTPM: 10.1
Sample A Female 14.0
Sample B Female 10.1
Sample C Male 12.6
Sample D Male 19.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.0
Samples: 4

Max nTPM: 99.1
Min nTPM: 83.2
Sample A Male 93.1
Sample B Male 99.1
Sample C Female 88.4
Sample D Female 83.2
Hippocampal formation
nTPM: 80.0
Samples: 4

Max nTPM: 88.6
Min nTPM: 74.8
Sample A Male 88.6
Sample B Male 79.0
Sample C Female 74.8
Sample D Female 77.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
71234531 Antisense, RP_050505_02_C01, Mouse strain C57BL/6J (56 days, male) 11.1

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