HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:24.2 nTPM
HPA:24.2 nTPM
GTEx:29.5 nTPM
FANTOM5:24.9 Scaled Tags Per Million
Pig:83.0 nTPM
Mouse:174.4 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.2
Sample id Sample description nTPM
Hippocampus
nTPM: 8.7
1911 Female, age 85, right hemisphere 27.5
2529 Female, age 94, left hemisphere 9.1
2621 Female, age 67, right hemisphere 8.8
1898 Male, age 80, left hemisphere 6.7
1855 Male, age 76, left hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
Dentate gyrus
nTPM: 1.0
1927 Female, age 91, both hemispheres 6.3
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 24.2
2613 Female, age 94, left hemisphere 45.8
2764 Male, age 80, right hemisphere 42.2
1938 Female, age 85, left hemisphere 18.7
1787 Male, age 76, left hemisphere 18.4
2686 Male, age 75, right hemisphere 14.9
2117 Female, age 91, right hemisphere 5.2
Hippocampus, CA1
nTPM: 19.2
2749 Male, age 80, left hemisphere 86.4
2527 Male, age 74, both hemispheres 6.6
2082 Female, age 91, right hemisphere 2.9
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 7.1
2437 Female, age 94, left hemisphere 15.0
1892 Male, age 76, both hemispheres 11.9
2249 Male, age 74, both hemispheres 11.4
2113 Female, age 91, right hemisphere 4.2
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
Hippocampus, CA3
nTPM: 21.6
2137 Male, age 80, left hemisphere 98.4
1867 Male, age 76, both hemispheres 20.6
1891 Female, age 85, both hemispheres 8.0
2436 Male, age 74, both hemispheres 2.9
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 20.3
2245 Female, age 91, both hemispheres 33.2
1850 Male, age 80, both hemispheres 26.6
2532 Female, age 72, left hemisphere 26.5
2622 Female, age 67, right hemisphere 26.4
2693 Female, age 94, both hemispheres 21.9
1990 Female, age 91, right hemisphere 21.7
1933 Female, age 85, both hemispheres 15.6
2018 Male, age 76, both hemispheres 12.6
2250 Female, age 67, right hemisphere 11.2
2692 Male, age 74, both hemispheres 7.6
Perirhinal gyrus
nTPM: 18.7
1794 Male, age 80, right hemisphere 28.9
1847 Female, age 91, left hemisphere 24.0
2848 Male, age 76, right hemisphere 21.4
1841 Female, age 85, right hemisphere 11.4
2521 Female, age 94, right hemisphere 7.7
Subiculum
nTPM: 18.9
1901 Male, age 80, both hemispheres 48.2
1977 Female, age 85, both hemispheres 21.5
2042 Male, age 76, both hemispheres 19.5
2438 Female, age 94, left hemisphere 16.4
2619 Male, age 74, both hemispheres 7.6
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.5
Samples: 197

Max nTPM: 114.7
Min nTPM: 0.5
Std nTPM: 26.7
Median nTPM: 24.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 114.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 110.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 108.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 103.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 102.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 101.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 91.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 87.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 83.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 81.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 81.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.9
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 22.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 83.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.1
Samples: 4

Max nTPM: 92.8
Min nTPM: 29.9
Sample A Female 88.5
Sample B Female 92.8
Sample C Male 85.2
Sample D Male 29.9
Entorhinal cortex
nTPM: 83.0
Samples: 4

Max nTPM: 95.8
Min nTPM: 72.1
Sample A Female 78.6
Sample B Female 85.3
Sample C Male 95.8
Sample D Male 72.1
Subiculum
nTPM: 70.6
Samples: 4

Max nTPM: 96.8
Min nTPM: 47.6
Sample A Female 96.8
Sample B Female 60.6
Sample C Male 77.3
Sample D Male 47.6
Ventral hippocampus
nTPM: 66.5
Samples: 4

Max nTPM: 153.8
Min nTPM: 17.4
Sample A Female 17.4
Sample B Female 45.1
Sample C Male 49.6
Sample D Male 153.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 174.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 174.5
Samples: 4

Max nTPM: 198.8
Min nTPM: 153.2
Sample A Male 153.2
Sample B Male 171.2
Sample C Female 174.6
Sample D Female 198.8
Hippocampal formation
nTPM: 129.1
Samples: 4

Max nTPM: 155.9
Min nTPM: 108.5
Sample A Male 155.9
Sample B Male 127.7
Sample C Female 108.5
Sample D Female 124.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
68861785 Antisense, RP_050301_01_A01, Mouse strain C57BL/6J (56 days, male) 12.5
70231303 Antisense, RP_050301_01_A01, Mouse strain C57BL/6J (56 days, male) 12.3

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