COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Low
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.2 nTPM
HPA:9.2 nTPM
GTEx:23.2 nTPM
FANTOM5:19.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA068265Antibody CAB047303
Endothelial cells Not detectedMedium
Glandular cells LowLow
Peripheral nerve/ganglion Not detectedLow



COLON - HPA RNA-seqi
Average nTPM 9.2
overview
Male, age 54 		Colon sample 67
nTPM: 7.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 4.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 7.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 11.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 7.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 11.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 18.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 12
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 23.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 20.3
Samples: 373

Max nTPM: 178.5
Min nTPM: 2.8
Std nTPM: 18.5
Median nTPM: 14.7
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 178.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 128.6
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 124.2
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 111.7
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 106.0
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 90.8
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 77.7
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 76.9
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 76.4
GTEX-1J1R8-1426-SM-CL55O 40-49 years, male 72.9
GTEX-1EU9M-2726-SM-7P8QD 60-69 years, male 72.7
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Colon - Transverse
Average nTPM: 23.2
Samples: 406

Max nTPM: 325.6
Min nTPM: 3.7
Std nTPM: 27.5
Median nTPM: 15.5
GTEX-1H1E6-1926-SM-9OSWD 30-39 years, male 325.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 192.1
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 172.1
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 169.7
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 143.9
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 124.7
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 101.5
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 101.2
GTEX-1MA7W-0626-SM-EV79Z 20-29 years, female 94.2
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 91.7
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 90.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 19.3
FF:10014-101C5 62,83,84 years, mixed 19.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.