HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.0 nTPM
HPA:42.0 nTPM
GTEx:40.9 nTPM
FANTOM5:39.0 Scaled Tags Per Million
Pig:80.4 nTPM
Mouse:98.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043786
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.0
Sample id Sample description nTPM
Hippocampus
nTPM: 42.0
1855 Male, age 76, left hemisphere 45.4
1911 Female, age 85, right hemisphere 42.9
1898 Male, age 80, left hemisphere 42.7
2529 Female, age 94, left hemisphere 42.1
2148 Female, age 91, left hemisphere 39.9
2621 Female, age 67, right hemisphere 39.1
Dentate gyrus
nTPM: 39.7
2010 Male, age 76, both hemispheres 44.7
2246 Female, age 85, both hemispheres 39.8
2530 Female, age 94, left hemisphere 39.5
2528 Male, age 74, both hemispheres 39.2
1927 Female, age 91, both hemispheres 38.1
2531 Female, age 67, both hemispheres 36.8
Entorhinal gyrus
nTPM: 39.3
2117 Female, age 91, right hemisphere 45.3
1938 Female, age 85, left hemisphere 42.0
1787 Male, age 76, left hemisphere 39.1
2686 Male, age 75, right hemisphere 38.3
2764 Male, age 80, right hemisphere 37.9
2613 Female, age 94, left hemisphere 33.3
Hippocampus, CA1
nTPM: 40.6
1873 Female, age 85, both hemispheres 42.8
2527 Male, age 74, both hemispheres 40.6
2045 Male, age 76, both hemispheres 40.2
2749 Male, age 80, left hemisphere 39.8
2082 Female, age 91, right hemisphere 39.7
Hippocampus, CA2
nTPM: 39.7
1940 Female, age 85, left hemisphere 42.5
1892 Male, age 76, both hemispheres 40.0
2113 Female, age 91, right hemisphere 39.7
2249 Male, age 74, both hemispheres 39.0
1963 Male, age 80, left hemisphere 38.8
2437 Female, age 94, left hemisphere 38.5
Hippocampus, CA3
nTPM: 39.1
1891 Female, age 85, both hemispheres 42.4
1867 Male, age 76, both hemispheres 40.7
2436 Male, age 74, both hemispheres 39.3
2137 Male, age 80, left hemisphere 39.0
2620 Female, age 94, left hemisphere 37.2
2861 Female, age 67, both hemispheres 35.8
Parahippocampal cortex
nTPM: 38.5
2018 Male, age 76, both hemispheres 40.8
2250 Female, age 67, right hemisphere 40.5
1933 Female, age 85, both hemispheres 39.4
1850 Male, age 80, both hemispheres 39.2
2692 Male, age 74, both hemispheres 38.7
2245 Female, age 91, both hemispheres 38.6
1990 Female, age 91, right hemisphere 37.9
2622 Female, age 67, right hemisphere 37.4
2693 Female, age 94, both hemispheres 36.7
2532 Female, age 72, left hemisphere 35.7
Perirhinal gyrus
nTPM: 39.0
2521 Female, age 94, right hemisphere 40.5
1841 Female, age 85, right hemisphere 39.7
2848 Male, age 76, right hemisphere 38.9
1794 Male, age 80, right hemisphere 38.2
1847 Female, age 91, left hemisphere 37.5
Subiculum
nTPM: 40.4
2729 Female, age 91, right hemisphere 42.9
1977 Female, age 85, both hemispheres 42.0
1901 Male, age 80, both hemispheres 41.4
2042 Male, age 76, both hemispheres 41.1
2619 Male, age 74, both hemispheres 39.7
2438 Female, age 94, left hemisphere 35.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.9
Samples: 197

Max nTPM: 111.1
Min nTPM: 23.2
Std nTPM: 12.0
Median nTPM: 38.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 111.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 98.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 81.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 78.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 75.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 73.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 73.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 72.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 64.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 60.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 59.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.0
FF:10153-102I9 76 years, female 48.7
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 80.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 80.4
Samples: 4

Max nTPM: 97.0
Min nTPM: 68.7
Sample A Female 97.0
Sample B Female 75.1
Sample C Male 80.9
Sample D Male 68.7
Entorhinal cortex
nTPM: 61.5
Samples: 4

Max nTPM: 69.8
Min nTPM: 54.3
Sample A Female 56.7
Sample B Female 69.8
Sample C Male 65.0
Sample D Male 54.3
Subiculum
nTPM: 64.5
Samples: 4

Max nTPM: 82.9
Min nTPM: 55.2
Sample A Female 82.9
Sample B Female 56.5
Sample C Male 55.2
Sample D Male 63.2
Ventral hippocampus
nTPM: 66.6
Samples: 4

Max nTPM: 78.1
Min nTPM: 55.1
Sample A Female 78.1
Sample B Female 55.1
Sample C Male 62.3
Sample D Male 70.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.1
Samples: 4

Max nTPM: 97.7
Min nTPM: 83.1
Sample A Male 91.7
Sample B Male 95.9
Sample C Female 97.7
Sample D Female 83.1
Hippocampal formation
nTPM: 98.1
Samples: 4

Max nTPM: 110.8
Min nTPM: 92.5
Sample A Male 110.8
Sample B Male 92.5
Sample C Female 94.5
Sample D Female 94.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
227534 Antisense, RP_040526_02_A12, Mouse strain C57BL/6J (56 days, male) 0.5
68203475 Antisense, RP_041208_01_B07, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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