HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:105.2 nTPM
HPA:105.2 nTPM
GTEx:167.5 nTPM
FANTOM5:86.4 Scaled Tags Per Million
Pig:94.9 nTPM
Mouse:563.0 nTPM
Allen mouse:26.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026719
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.2
Sample id Sample description nTPM
Hippocampus
nTPM: 28.3
1898 Male, age 80, left hemisphere 70.1
2621 Female, age 67, right hemisphere 57.2
2148 Female, age 91, left hemisphere 26.4
1855 Male, age 76, left hemisphere 13.4
1911 Female, age 85, right hemisphere 2.4
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 43.4
1927 Female, age 91, both hemispheres 92.0
2530 Female, age 94, left hemisphere 76.4
2531 Female, age 67, both hemispheres 44.5
2246 Female, age 85, both hemispheres 18.5
2010 Male, age 76, both hemispheres 17.3
2528 Male, age 74, both hemispheres 11.4
Entorhinal gyrus
nTPM: 76.6
2613 Female, age 94, left hemisphere 159.7
2764 Male, age 80, right hemisphere 103.8
1938 Female, age 85, left hemisphere 82.4
1787 Male, age 76, left hemisphere 65.4
2686 Male, age 75, right hemisphere 48.5
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 41.6
2749 Male, age 80, left hemisphere 115.9
1873 Female, age 85, both hemispheres 46.5
2527 Male, age 74, both hemispheres 27.7
2082 Female, age 91, right hemisphere 12.6
2045 Male, age 76, both hemispheres 5.3
Hippocampus, CA2
nTPM: 43.1
1892 Male, age 76, both hemispheres 91.0
2437 Female, age 94, left hemisphere 73.8
1963 Male, age 80, left hemisphere 53.5
1940 Female, age 85, left hemisphere 30.3
2113 Female, age 91, right hemisphere 10.3
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 49.8
2620 Female, age 94, left hemisphere 83.6
2861 Female, age 67, both hemispheres 79.7
2137 Male, age 80, left hemisphere 76.1
1867 Male, age 76, both hemispheres 44.9
1891 Female, age 85, both hemispheres 12.5
2436 Male, age 74, both hemispheres 2.4
Parahippocampal cortex
nTPM: 63.5
1850 Male, age 80, both hemispheres 93.6
1990 Female, age 91, right hemisphere 88.7
2693 Female, age 94, both hemispheres 86.6
2245 Female, age 91, both hemispheres 70.8
2622 Female, age 67, right hemisphere 68.8
1933 Female, age 85, both hemispheres 61.9
2250 Female, age 67, right hemisphere 52.7
2692 Male, age 74, both hemispheres 50.1
2532 Female, age 72, left hemisphere 49.9
2018 Male, age 76, both hemispheres 11.6
Perirhinal gyrus
nTPM: 105.2
1847 Female, age 91, left hemisphere 171.1
1794 Male, age 80, right hemisphere 123.1
1841 Female, age 85, right hemisphere 91.2
2521 Female, age 94, right hemisphere 89.9
2848 Male, age 76, right hemisphere 50.9
Subiculum
nTPM: 31.2
1977 Female, age 85, both hemispheres 56.8
2438 Female, age 94, left hemisphere 46.6
2619 Male, age 74, both hemispheres 44.3
1901 Male, age 80, both hemispheres 39.4
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 167.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 167.5
Samples: 197

Max nTPM: 411.1
Min nTPM: 10.7
Std nTPM: 96.4
Median nTPM: 159.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 411.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 379.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 373.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 363.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 363.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 355.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 354.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 351.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 346.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 342.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 340.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.4
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 84.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 90.2
Samples: 4

Max nTPM: 125.7
Min nTPM: 61.0
Sample A Female 125.7
Sample B Female 110.2
Sample C Male 64.0
Sample D Male 61.0
Entorhinal cortex
nTPM: 82.3
Samples: 4

Max nTPM: 92.2
Min nTPM: 64.7
Sample A Female 80.0
Sample B Female 92.2
Sample C Male 92.2
Sample D Male 64.7
Subiculum
nTPM: 78.0
Samples: 4

Max nTPM: 103.9
Min nTPM: 58.4
Sample A Female 103.9
Sample B Female 72.3
Sample C Male 77.5
Sample D Male 58.4
Ventral hippocampus
nTPM: 94.9
Samples: 4

Max nTPM: 117.8
Min nTPM: 64.4
Sample A Female 97.3
Sample B Female 64.4
Sample C Male 117.8
Sample D Male 100.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 563.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 563.0
Samples: 4

Max nTPM: 657.2
Min nTPM: 466.3
Sample A Male 553.6
Sample B Male 574.9
Sample C Female 466.3
Sample D Female 657.2
Hippocampal formation
nTPM: 398.4
Samples: 4

Max nTPM: 419.8
Min nTPM: 387.7
Sample A Male 419.8
Sample B Male 387.7
Sample C Female 396.5
Sample D Female 389.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 26.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.2
564653 Antisense, RP_040826_01_B10, Mouse strain C57BL/6J (56 days, male) 26.8
70616006 Antisense, RP_050725_01_D09, Mouse strain C57BL/6J (56 days, male) 25.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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