HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.8 nTPM
HPA:29.8 nTPM
GTEx:18.4 nTPM
FANTOM5:30.2 Scaled Tags Per Million
Pig:14.7 nTPM
Mouse:56.1 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.8
Sample id Sample description nTPM
Hippocampus
nTPM: 29.7
1911 Female, age 85, right hemisphere 31.4
1855 Male, age 76, left hemisphere 31.1
2148 Female, age 91, left hemisphere 30.1
2529 Female, age 94, left hemisphere 29.8
1898 Male, age 80, left hemisphere 28.3
2621 Female, age 67, right hemisphere 27.7
Dentate gyrus
nTPM: 28.2
2530 Female, age 94, left hemisphere 31.3
2528 Male, age 74, both hemispheres 29.1
2246 Female, age 85, both hemispheres 28.8
2010 Male, age 76, both hemispheres 28.1
1927 Female, age 91, both hemispheres 27.1
2531 Female, age 67, both hemispheres 24.6
Entorhinal gyrus
nTPM: 27.0
2117 Female, age 91, right hemisphere 30.9
1787 Male, age 76, left hemisphere 28.1
2686 Male, age 75, right hemisphere 26.2
1938 Female, age 85, left hemisphere 26.0
2613 Female, age 94, left hemisphere 25.5
2764 Male, age 80, right hemisphere 25.2
Hippocampus, CA1
nTPM: 28.0
2527 Male, age 74, both hemispheres 30.1
2082 Female, age 91, right hemisphere 29.2
2045 Male, age 76, both hemispheres 29.0
1873 Female, age 85, both hemispheres 27.7
2749 Male, age 80, left hemisphere 24.2
Hippocampus, CA2
nTPM: 29.8
2437 Female, age 94, left hemisphere 32.2
2249 Male, age 74, both hemispheres 31.9
2113 Female, age 91, right hemisphere 30.5
1940 Female, age 85, left hemisphere 30.3
1963 Male, age 80, left hemisphere 28.6
1892 Male, age 76, both hemispheres 25.6
Hippocampus, CA3
nTPM: 27.6
2861 Female, age 67, both hemispheres 30.1
1867 Male, age 76, both hemispheres 28.9
2436 Male, age 74, both hemispheres 28.2
1891 Female, age 85, both hemispheres 27.6
2620 Female, age 94, left hemisphere 26.8
2137 Male, age 80, left hemisphere 23.8
Parahippocampal cortex
nTPM: 26.4
2018 Male, age 76, both hemispheres 30.1
2692 Male, age 74, both hemispheres 28.6
2622 Female, age 67, right hemisphere 28.5
1933 Female, age 85, both hemispheres 26.9
2245 Female, age 91, both hemispheres 25.9
2532 Female, age 72, left hemisphere 25.3
1990 Female, age 91, right hemisphere 25.0
1850 Male, age 80, both hemispheres 24.9
2250 Female, age 67, right hemisphere 24.9
2693 Female, age 94, both hemispheres 23.9
Perirhinal gyrus
nTPM: 24.7
2848 Male, age 76, right hemisphere 25.9
1794 Male, age 80, right hemisphere 25.7
1841 Female, age 85, right hemisphere 25.0
1847 Female, age 91, left hemisphere 23.6
2521 Female, age 94, right hemisphere 23.2
Subiculum
nTPM: 28.6
2042 Male, age 76, both hemispheres 30.8
2729 Female, age 91, right hemisphere 30.0
2438 Female, age 94, left hemisphere 29.9
2619 Male, age 74, both hemispheres 29.4
1901 Male, age 80, both hemispheres 27.2
1977 Female, age 85, both hemispheres 24.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.4
Samples: 197

Max nTPM: 45.1
Min nTPM: 5.4
Std nTPM: 6.7
Median nTPM: 17.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 45.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 38.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 33.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 30.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 30.8
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 30.7
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 30.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 30.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 30.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 30.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 29.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.2
FF:10153-102I9 76 years, female 38.4
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 17.2
Min nTPM: 10.2
Sample A Female 17.2
Sample B Female 10.2
Sample C Male 17.0
Sample D Male 11.8
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.7
Sample A Female 14.3
Sample B Female 16.0
Sample C Male 15.9
Sample D Male 12.7
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 15.9
Min nTPM: 9.9
Sample A Female 15.9
Sample B Female 9.9
Sample C Male 11.1
Sample D Male 13.8
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 18.1
Min nTPM: 7.9
Sample A Female 12.9
Sample B Female 7.9
Sample C Male 18.1
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.9
Samples: 4

Max nTPM: 59.7
Min nTPM: 45.2
Sample A Male 59.7
Sample B Male 50.4
Sample C Female 45.2
Sample D Female 48.3
Hippocampal formation
nTPM: 56.1
Samples: 4

Max nTPM: 68.0
Min nTPM: 48.6
Sample A Male 48.6
Sample B Male 50.6
Sample C Female 57.2
Sample D Female 68.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
69014476 Antisense, RP_050310_01_B10, Mouse strain C57BL/6J (56 days, male) 3.3
70436729 Antisense, RP_050310_01_B10, Mouse strain C57BL/6J (56 days, male) 1.3

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