HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.7 nTPM
HPA:33.7 nTPM
GTEx:34.1 nTPM
FANTOM5:62.6 Scaled Tags Per Million
Pig:68.6 nTPM
Mouse:16.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041189Antibody HPA051647Antibody CAB012264
Glial cells HighHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.7
Sample id Sample description nTPM
Hippocampus
nTPM: 30.0
2529 Female, age 94, left hemisphere 31.8
1855 Male, age 76, left hemisphere 31.3
1898 Male, age 80, left hemisphere 30.7
2621 Female, age 67, right hemisphere 29.5
2148 Female, age 91, left hemisphere 28.5
1911 Female, age 85, right hemisphere 28.3
Dentate gyrus
nTPM: 29.2
2530 Female, age 94, left hemisphere 36.3
2531 Female, age 67, both hemispheres 29.8
2010 Male, age 76, both hemispheres 28.9
2528 Male, age 74, both hemispheres 28.8
2246 Female, age 85, both hemispheres 27.4
1927 Female, age 91, both hemispheres 24.2
Entorhinal gyrus
nTPM: 33.7
1787 Male, age 76, left hemisphere 36.8
2117 Female, age 91, right hemisphere 36.7
2764 Male, age 80, right hemisphere 34.6
2686 Male, age 75, right hemisphere 33.4
1938 Female, age 85, left hemisphere 31.5
2613 Female, age 94, left hemisphere 29.0
Hippocampus, CA1
nTPM: 28.7
2749 Male, age 80, left hemisphere 32.2
2527 Male, age 74, both hemispheres 29.5
2082 Female, age 91, right hemisphere 28.4
2045 Male, age 76, both hemispheres 26.8
1873 Female, age 85, both hemispheres 26.4
Hippocampus, CA2
nTPM: 29.0
1963 Male, age 80, left hemisphere 31.7
1940 Female, age 85, left hemisphere 29.6
2249 Male, age 74, both hemispheres 28.8
2437 Female, age 94, left hemisphere 28.8
1892 Male, age 76, both hemispheres 27.7
2113 Female, age 91, right hemisphere 27.3
Hippocampus, CA3
nTPM: 28.5
2861 Female, age 67, both hemispheres 34.0
2620 Female, age 94, left hemisphere 29.4
1867 Male, age 76, both hemispheres 29.3
2137 Male, age 80, left hemisphere 27.1
1891 Female, age 85, both hemispheres 26.8
2436 Male, age 74, both hemispheres 24.2
Parahippocampal cortex
nTPM: 29.1
2692 Male, age 74, both hemispheres 33.3
2622 Female, age 67, right hemisphere 32.1
2245 Female, age 91, both hemispheres 31.5
2532 Female, age 72, left hemisphere 30.6
1990 Female, age 91, right hemisphere 28.8
1933 Female, age 85, both hemispheres 28.5
2250 Female, age 67, right hemisphere 28.0
2018 Male, age 76, both hemispheres 26.6
1850 Male, age 80, both hemispheres 26.1
2693 Female, age 94, both hemispheres 25.2
Perirhinal gyrus
nTPM: 28.7
2848 Male, age 76, right hemisphere 32.3
1794 Male, age 80, right hemisphere 30.5
2521 Female, age 94, right hemisphere 27.6
1841 Female, age 85, right hemisphere 26.7
1847 Female, age 91, left hemisphere 26.2
Subiculum
nTPM: 29.5
1977 Female, age 85, both hemispheres 32.5
2619 Male, age 74, both hemispheres 32.4
1901 Male, age 80, both hemispheres 30.6
2042 Male, age 76, both hemispheres 29.3
2729 Female, age 91, right hemisphere 26.5
2438 Female, age 94, left hemisphere 25.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.1
Samples: 197

Max nTPM: 63.3
Min nTPM: 11.2
Std nTPM: 9.3
Median nTPM: 33.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 63.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 62.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 59.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 58.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 56.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 55.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 53.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 51.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 51.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 50.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.6
FF:10169-103B7 60 years, female 63.8
FF:10153-102I9 76 years, female 61.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 68.7
Samples: 4

Max nTPM: 88.3
Min nTPM: 56.1
Sample A Female 88.3
Sample B Female 61.6
Sample C Male 68.6
Sample D Male 56.1
Entorhinal cortex
nTPM: 62.3
Samples: 4

Max nTPM: 68.5
Min nTPM: 57.0
Sample A Female 59.5
Sample B Female 64.0
Sample C Male 68.5
Sample D Male 57.0
Subiculum
nTPM: 63.2
Samples: 4

Max nTPM: 82.4
Min nTPM: 54.8
Sample A Female 82.4
Sample B Female 54.8
Sample C Male 55.8
Sample D Male 59.9
Ventral hippocampus
nTPM: 65.1
Samples: 4

Max nTPM: 77.2
Min nTPM: 51.3
Sample A Female 73.8
Sample B Female 51.3
Sample C Male 77.2
Sample D Male 58.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.9
Sample A Male 17.1
Sample B Male 16.2
Sample C Female 13.9
Sample D Female 17.1
Hippocampal formation
nTPM: 15.9
Samples: 4

Max nTPM: 16.3
Min nTPM: 15.4
Sample A Male 15.7
Sample B Male 15.4
Sample C Female 16.3
Sample D Female 16.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
70545961 Antisense, RP_050623_03_C12, Mouse strain C57BL/6J (56 days, male) 0.8

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