HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.8 nTPM
HPA:12.8 nTPM
GTEx:17.2 nTPM
FANTOM5:22.5 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:70.7 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.8
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
1855 Male, age 76, left hemisphere 14.4
2529 Female, age 94, left hemisphere 13.5
1898 Male, age 80, left hemisphere 12.6
1911 Female, age 85, right hemisphere 12.0
2148 Female, age 91, left hemisphere 11.9
2621 Female, age 67, right hemisphere 11.0
Dentate gyrus
nTPM: 11.4
2010 Male, age 76, both hemispheres 14.8
2528 Male, age 74, both hemispheres 12.0
2246 Female, age 85, both hemispheres 11.6
1927 Female, age 91, both hemispheres 11.2
2530 Female, age 94, left hemisphere 10.5
2531 Female, age 67, both hemispheres 8.1
Entorhinal gyrus
nTPM: 11.5
2117 Female, age 91, right hemisphere 13.1
1938 Female, age 85, left hemisphere 12.9
1787 Male, age 76, left hemisphere 12.6
2764 Male, age 80, right hemisphere 11.3
2686 Male, age 75, right hemisphere 10.0
2613 Female, age 94, left hemisphere 9.2
Hippocampus, CA1
nTPM: 12.8
2527 Male, age 74, both hemispheres 14.3
2749 Male, age 80, left hemisphere 13.3
1873 Female, age 85, both hemispheres 13.0
2045 Male, age 76, both hemispheres 12.0
2082 Female, age 91, right hemisphere 11.4
Hippocampus, CA2
nTPM: 12.5
2249 Male, age 74, both hemispheres 13.8
1963 Male, age 80, left hemisphere 12.8
1892 Male, age 76, both hemispheres 12.2
1940 Female, age 85, left hemisphere 12.2
2437 Female, age 94, left hemisphere 12.1
2113 Female, age 91, right hemisphere 11.6
Hippocampus, CA3
nTPM: 12.0
2436 Male, age 74, both hemispheres 14.5
1867 Male, age 76, both hemispheres 13.7
2137 Male, age 80, left hemisphere 12.7
1891 Female, age 85, both hemispheres 11.8
2620 Female, age 94, left hemisphere 9.7
2861 Female, age 67, both hemispheres 9.4
Parahippocampal cortex
nTPM: 11.6
2250 Female, age 67, right hemisphere 13.0
1933 Female, age 85, both hemispheres 12.9
2018 Male, age 76, both hemispheres 12.7
1850 Male, age 80, both hemispheres 12.2
2532 Female, age 72, left hemisphere 11.9
2692 Male, age 74, both hemispheres 11.2
1990 Female, age 91, right hemisphere 10.9
2245 Female, age 91, both hemispheres 10.9
2693 Female, age 94, both hemispheres 10.9
2622 Female, age 67, right hemisphere 9.5
Perirhinal gyrus
nTPM: 11.7
2521 Female, age 94, right hemisphere 12.8
1841 Female, age 85, right hemisphere 12.2
1847 Female, age 91, left hemisphere 11.7
1794 Male, age 80, right hemisphere 11.3
2848 Male, age 76, right hemisphere 10.5
Subiculum
nTPM: 12.1
2042 Male, age 76, both hemispheres 13.6
1977 Female, age 85, both hemispheres 12.6
1901 Male, age 80, both hemispheres 12.4
2729 Female, age 91, right hemisphere 11.6
2619 Male, age 74, both hemispheres 11.4
2438 Female, age 94, left hemisphere 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 26.9
Min nTPM: 9.0
Std nTPM: 3.3
Median nTPM: 16.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 26.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 25.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 25.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 24.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 23.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 23.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 23.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 23.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 23.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 22.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 22.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.5
FF:10153-102I9 76 years, female 32.4
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 22.2
Min nTPM: 15.7
Sample A Female 22.2
Sample B Female 16.4
Sample C Male 17.9
Sample D Male 15.7
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 16.4
Min nTPM: 13.1
Sample A Female 14.4
Sample B Female 16.4
Sample C Male 15.9
Sample D Male 13.1
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.8
Sample A Female 18.2
Sample B Female 13.8
Sample C Male 14.1
Sample D Male 15.4
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 17.0
Min nTPM: 14.3
Sample A Female 17.0
Sample B Female 15.6
Sample C Male 14.3
Sample D Male 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.4
Samples: 4

Max nTPM: 64.8
Min nTPM: 41.0
Sample A Male 55.7
Sample B Male 52.1
Sample C Female 64.8
Sample D Female 41.0
Hippocampal formation
nTPM: 70.8
Samples: 4

Max nTPM: 77.5
Min nTPM: 67.5
Sample A Male 77.5
Sample B Male 68.9
Sample C Female 67.5
Sample D Female 69.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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