HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:46.2 nTPM
HPA:46.2 nTPM
GTEx:16.1 nTPM
FANTOM5:3.7 Scaled Tags Per Million
Mouse:38.5 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023440
Glial cells Medium
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.2
Sample id Sample description nTPM
Hippocampus
nTPM: 44.6
1855 Male, age 76, left hemisphere 82.7
2148 Female, age 91, left hemisphere 50.9
1898 Male, age 80, left hemisphere 50.5
2621 Female, age 67, right hemisphere 33.0
1911 Female, age 85, right hemisphere 32.5
2529 Female, age 94, left hemisphere 17.8
Dentate gyrus
nTPM: 41.5
2010 Male, age 76, both hemispheres 64.3
1927 Female, age 91, both hemispheres 48.9
2530 Female, age 94, left hemisphere 36.3
2246 Female, age 85, both hemispheres 35.3
2528 Male, age 74, both hemispheres 35.2
2531 Female, age 67, both hemispheres 29.2
Entorhinal gyrus
nTPM: 7.8
2117 Female, age 91, right hemisphere 10.1
2686 Male, age 75, right hemisphere 9.3
2613 Female, age 94, left hemisphere 8.7
1938 Female, age 85, left hemisphere 7.8
1787 Male, age 76, left hemisphere 5.8
2764 Male, age 80, right hemisphere 5.0
Hippocampus, CA1
nTPM: 46.2
2749 Male, age 80, left hemisphere 76.1
1873 Female, age 85, both hemispheres 63.3
2045 Male, age 76, both hemispheres 50.8
2527 Male, age 74, both hemispheres 28.0
2082 Female, age 91, right hemisphere 13.1
Hippocampus, CA2
nTPM: 33.9
1963 Male, age 80, left hemisphere 79.1
1892 Male, age 76, both hemispheres 60.6
2249 Male, age 74, both hemispheres 21.1
2437 Female, age 94, left hemisphere 18.8
2113 Female, age 91, right hemisphere 16.5
1940 Female, age 85, left hemisphere 7.3
Hippocampus, CA3
nTPM: 35.4
2137 Male, age 80, left hemisphere 58.9
2861 Female, age 67, both hemispheres 48.6
2620 Female, age 94, left hemisphere 35.9
1891 Female, age 85, both hemispheres 23.1
1867 Male, age 76, both hemispheres 22.9
2436 Male, age 74, both hemispheres 22.9
Parahippocampal cortex
nTPM: 9.0
2245 Female, age 91, both hemispheres 19.5
2692 Male, age 74, both hemispheres 11.5
2018 Male, age 76, both hemispheres 10.9
2250 Female, age 67, right hemisphere 9.9
1933 Female, age 85, both hemispheres 8.8
1990 Female, age 91, right hemisphere 8.2
2622 Female, age 67, right hemisphere 7.4
2693 Female, age 94, both hemispheres 6.9
1850 Male, age 80, both hemispheres 3.4
2532 Female, age 72, left hemisphere 3.3
Perirhinal gyrus
nTPM: 5.5
1847 Female, age 91, left hemisphere 9.6
2521 Female, age 94, right hemisphere 6.1
2848 Male, age 76, right hemisphere 4.6
1841 Female, age 85, right hemisphere 4.0
1794 Male, age 80, right hemisphere 3.2
Subiculum
nTPM: 16.9
2729 Female, age 91, right hemisphere 27.3
1901 Male, age 80, both hemispheres 22.8
2042 Male, age 76, both hemispheres 20.4
2438 Female, age 94, left hemisphere 12.7
2619 Male, age 74, both hemispheres 10.6
1977 Female, age 85, both hemispheres 7.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.1
Samples: 197

Max nTPM: 82.2
Min nTPM: 0.7
Std nTPM: 13.8
Median nTPM: 11.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 82.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 79.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 66.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 60.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 55.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 52.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 51.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 46.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 44.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 44.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 43.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 3.7
FF:10169-103B7 60 years, female 4.1
FF:10153-102I9 76 years, female 3.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 13.1
Min nTPM: 2.6
Sample A Male 7.1
Sample B Male 2.6
Sample C Female 13.1
Sample D Female 6.5
Hippocampal formation
nTPM: 38.5
Samples: 4

Max nTPM: 61.5
Min nTPM: 20.0
Sample A Male 20.0
Sample B Male 45.1
Sample C Female 61.5
Sample D Female 27.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
74821852 Antisense, RP_060321_02_E02, Mouse strain C57BL/6J (56 days, male) 10.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.