HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.0 nTPM
HPA:25.0 nTPM
GTEx:25.4 nTPM
FANTOM5:43.7 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:30.3 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA032095Antibody HPA032096
Glial cells Not detectedLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 15.0
2529 Female, age 94, left hemisphere 21.8
1898 Male, age 80, left hemisphere 15.0
2621 Female, age 67, right hemisphere 15.0
1911 Female, age 85, right hemisphere 14.5
1855 Male, age 76, left hemisphere 13.4
2148 Female, age 91, left hemisphere 10.2
Dentate gyrus
nTPM: 15.5
2530 Female, age 94, left hemisphere 20.5
2246 Female, age 85, both hemispheres 18.9
2531 Female, age 67, both hemispheres 15.9
2010 Male, age 76, both hemispheres 15.2
2528 Male, age 74, both hemispheres 14.9
1927 Female, age 91, both hemispheres 7.3
Entorhinal gyrus
nTPM: 25.0
2613 Female, age 94, left hemisphere 37.3
2764 Male, age 80, right hemisphere 27.1
2117 Female, age 91, right hemisphere 22.4
1787 Male, age 76, left hemisphere 22.0
1938 Female, age 85, left hemisphere 21.4
2686 Male, age 75, right hemisphere 19.7
Hippocampus, CA1
nTPM: 13.9
2082 Female, age 91, right hemisphere 19.5
2527 Male, age 74, both hemispheres 17.3
1873 Female, age 85, both hemispheres 11.3
2045 Male, age 76, both hemispheres 11.3
2749 Male, age 80, left hemisphere 10.1
Hippocampus, CA2
nTPM: 16.8
2437 Female, age 94, left hemisphere 22.9
2249 Male, age 74, both hemispheres 18.0
1940 Female, age 85, left hemisphere 17.8
2113 Female, age 91, right hemisphere 16.3
1892 Male, age 76, both hemispheres 13.7
1963 Male, age 80, left hemisphere 12.3
Hippocampus, CA3
nTPM: 13.8
1891 Female, age 85, both hemispheres 17.0
1867 Male, age 76, both hemispheres 16.2
2436 Male, age 74, both hemispheres 16.2
2861 Female, age 67, both hemispheres 13.5
2620 Female, age 94, left hemisphere 11.4
2137 Male, age 80, left hemisphere 8.4
Parahippocampal cortex
nTPM: 20.4
2532 Female, age 72, left hemisphere 25.2
2622 Female, age 67, right hemisphere 24.7
2692 Male, age 74, both hemispheres 21.8
1933 Female, age 85, both hemispheres 21.4
1990 Female, age 91, right hemisphere 21.0
2018 Male, age 76, both hemispheres 19.8
1850 Male, age 80, both hemispheres 19.1
2693 Female, age 94, both hemispheres 17.9
2250 Female, age 67, right hemisphere 17.8
2245 Female, age 91, both hemispheres 14.9
Perirhinal gyrus
nTPM: 18.0
2848 Male, age 76, right hemisphere 20.6
1794 Male, age 80, right hemisphere 19.3
1847 Female, age 91, left hemisphere 16.9
1841 Female, age 85, right hemisphere 16.5
2521 Female, age 94, right hemisphere 16.5
Subiculum
nTPM: 20.1
2438 Female, age 94, left hemisphere 24.1
1901 Male, age 80, both hemispheres 20.3
1977 Female, age 85, both hemispheres 20.3
2042 Male, age 76, both hemispheres 20.0
2619 Male, age 74, both hemispheres 19.4
2729 Female, age 91, right hemisphere 16.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.4
Samples: 197

Max nTPM: 41.1
Min nTPM: 10.4
Std nTPM: 5.9
Median nTPM: 24.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 41.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 41.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 40.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 39.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 38.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 37.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 36.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 36.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 36.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 35.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.7
FF:10153-102I9 76 years, female 50.9
FF:10169-103B7 60 years, female 36.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 16.6
Min nTPM: 6.6
Sample A Female 13.0
Sample B Female 11.1
Sample C Male 16.6
Sample D Male 6.6
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 25.6
Min nTPM: 21.1
Sample A Female 22.2
Sample B Female 25.6
Sample C Male 21.1
Sample D Male 23.6
Subiculum
nTPM: 19.6
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.4
Sample A Female 21.2
Sample B Female 19.1
Sample C Male 21.6
Sample D Male 16.4
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 23.2
Min nTPM: 12.4
Sample A Female 18.5
Sample B Female 12.4
Sample C Male 23.2
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 32.6
Min nTPM: 27.4
Sample A Male 31.4
Sample B Male 29.6
Sample C Female 27.4
Sample D Female 32.6
Hippocampal formation
nTPM: 23.1
Samples: 4

Max nTPM: 23.8
Min nTPM: 22.2
Sample A Male 22.2
Sample B Male 23.3
Sample C Female 23.1
Sample D Female 23.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
77800935 Antisense, RP_070219_01_B03, Mouse strain C57BL/6J (56 days, male) 2.7
72007937 Antisense, RP_051017_01_B06, Mouse strain C57BL/6J (56 days, male) 1.1
67792208 Antisense, RP_040920_01_E04, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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