COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:20.6 nTPM
HPA:13.8 nTPM
GTEx:20.6 nTPM
FANTOM5:15.4 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 13.8
overview
Male, age 54 		Colon sample 67
nTPM: 9.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 13.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 18.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 29.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 20.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 1.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 4.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 31.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 3.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 17.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 14.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 10.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 8.3
Samples: 373

Max nTPM: 78.5
Min nTPM: 0.7
Std nTPM: 8.0
Median nTPM: 6.2
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 78.5
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 67.1
GTEX-13113-1426-SM-5EGHU 60-69 years, female 47.6
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 46.7
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 43.3
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 37.5
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 37.0
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 27.1
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 26.6
GTEX-1PFEY-1726-SM-DPRZ4 30-39 years, male 25.5
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 25.1
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Colon - Transverse
Average nTPM: 20.6
Samples: 406

Max nTPM: 168.9
Min nTPM: 0.4
Std nTPM: 21.8
Median nTPM: 12.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 168.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 139.4
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 120.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 115.7
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 106.5
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 87.7
GTEX-R55G-1226-SM-48FDC 40-49 years, female 80.5
GTEX-1JKYN-2326-SM-CGQG7 30-39 years, male 78.7
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 78.6
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 78.6
GTEX-14PKV-2126-SM-664O3 20-29 years, female 76.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 15.4
FF:10014-101C5 62,83,84 years, mixed 15.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.