HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.5 nTPM
HPA:14.5 nTPM
GTEx:11.7 nTPM
FANTOM5:59.4 Scaled Tags Per Million
Pig:53.9 nTPM
Mouse:73.9 nTPM
Allen mouse:12.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036959Antibody HPA044074
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1855 Male, age 76, left hemisphere 13.7
2621 Female, age 67, right hemisphere 13.2
2148 Female, age 91, left hemisphere 12.7
1898 Male, age 80, left hemisphere 10.9
1911 Female, age 85, right hemisphere 9.7
2529 Female, age 94, left hemisphere 7.8
Dentate gyrus
nTPM: 11.3
2531 Female, age 67, both hemispheres 14.2
1927 Female, age 91, both hemispheres 13.8
2010 Male, age 76, both hemispheres 12.5
2246 Female, age 85, both hemispheres 11.6
2528 Male, age 74, both hemispheres 7.7
2530 Female, age 94, left hemisphere 7.7
Entorhinal gyrus
nTPM: 7.8
1787 Male, age 76, left hemisphere 11.0
2764 Male, age 80, right hemisphere 10.3
1938 Female, age 85, left hemisphere 7.1
2686 Male, age 75, right hemisphere 7.0
2613 Female, age 94, left hemisphere 6.2
2117 Female, age 91, right hemisphere 5.4
Hippocampus, CA1
nTPM: 14.5
2749 Male, age 80, left hemisphere 29.2
1873 Female, age 85, both hemispheres 11.4
2527 Male, age 74, both hemispheres 11.0
2045 Male, age 76, both hemispheres 10.5
2082 Female, age 91, right hemisphere 10.3
Hippocampus, CA2
nTPM: 9.9
1892 Male, age 76, both hemispheres 13.7
1963 Male, age 80, left hemisphere 12.8
2113 Female, age 91, right hemisphere 9.1
2249 Male, age 74, both hemispheres 8.3
1940 Female, age 85, left hemisphere 8.1
2437 Female, age 94, left hemisphere 7.6
Hippocampus, CA3
nTPM: 13.9
2137 Male, age 80, left hemisphere 27.7
2620 Female, age 94, left hemisphere 18.6
2861 Female, age 67, both hemispheres 16.2
1867 Male, age 76, both hemispheres 9.0
2436 Male, age 74, both hemispheres 6.5
1891 Female, age 85, both hemispheres 5.3
Parahippocampal cortex
nTPM: 11.2
2245 Female, age 91, both hemispheres 15.7
2622 Female, age 67, right hemisphere 15.2
2693 Female, age 94, both hemispheres 15.0
2532 Female, age 72, left hemisphere 13.3
1933 Female, age 85, both hemispheres 11.7
1850 Male, age 80, both hemispheres 11.5
2250 Female, age 67, right hemisphere 11.3
2018 Male, age 76, both hemispheres 7.3
1990 Female, age 91, right hemisphere 6.3
2692 Male, age 74, both hemispheres 5.1
Perirhinal gyrus
nTPM: 14.4
1794 Male, age 80, right hemisphere 17.2
2848 Male, age 76, right hemisphere 16.1
1841 Female, age 85, right hemisphere 13.6
2521 Female, age 94, right hemisphere 13.6
1847 Female, age 91, left hemisphere 11.4
Subiculum
nTPM: 7.6
1901 Male, age 80, both hemispheres 9.9
1977 Female, age 85, both hemispheres 8.3
2729 Female, age 91, right hemisphere 8.1
2438 Female, age 94, left hemisphere 7.0
2619 Male, age 74, both hemispheres 7.0
2042 Male, age 76, both hemispheres 5.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 23.3
Min nTPM: 2.8
Std nTPM: 4.0
Median nTPM: 11.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 23.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 20.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 20.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 19.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 19.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 19.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 19.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 19.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 18.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 18.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.4
FF:10169-103B7 60 years, female 61.7
FF:10153-102I9 76 years, female 57.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 60.8
Min nTPM: 44.2
Sample A Female 58.5
Sample B Female 60.8
Sample C Male 44.2
Sample D Male 52.2
Entorhinal cortex
nTPM: 48.1
Samples: 4

Max nTPM: 50.7
Min nTPM: 44.8
Sample A Female 50.7
Sample B Female 44.8
Sample C Male 48.9
Sample D Male 48.1
Subiculum
nTPM: 45.1
Samples: 4

Max nTPM: 49.6
Min nTPM: 40.5
Sample A Female 49.6
Sample B Female 44.5
Sample C Male 45.9
Sample D Male 40.5
Ventral hippocampus
nTPM: 53.3
Samples: 4

Max nTPM: 60.7
Min nTPM: 42.4
Sample A Female 52.5
Sample B Female 42.4
Sample C Male 57.6
Sample D Male 60.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.4
Samples: 4

Max nTPM: 77.6
Min nTPM: 61.1
Sample A Male 64.5
Sample B Male 62.2
Sample C Female 61.1
Sample D Female 77.6
Hippocampal formation
nTPM: 73.9
Samples: 4

Max nTPM: 86.2
Min nTPM: 62.2
Sample A Male 62.2
Sample B Male 82.6
Sample C Female 86.2
Sample D Female 64.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.2
316 Antisense, RP_Baylor_103404, Mouse strain C57BL/6J (56 days, male) 12.2
317 Antisense, RP_Baylor_103404, Mouse strain C57BL/6J (56 days, male) 10.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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