HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.8 nTPM
HPA:30.8 nTPM
GTEx:39.4 nTPM
FANTOM5:24.7 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:35.5 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002192
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.8
Sample id Sample description nTPM
Hippocampus
nTPM: 28.0
1855 Male, age 76, left hemisphere 30.7
2621 Female, age 67, right hemisphere 29.2
2529 Female, age 94, left hemisphere 28.6
2148 Female, age 91, left hemisphere 28.5
1898 Male, age 80, left hemisphere 25.5
1911 Female, age 85, right hemisphere 25.3
Dentate gyrus
nTPM: 29.3
2010 Male, age 76, both hemispheres 32.2
1927 Female, age 91, both hemispheres 29.6
2531 Female, age 67, both hemispheres 29.4
2530 Female, age 94, left hemisphere 29.2
2246 Female, age 85, both hemispheres 28.5
2528 Male, age 74, both hemispheres 27.1
Entorhinal gyrus
nTPM: 29.9
2613 Female, age 94, left hemisphere 32.6
2764 Male, age 80, right hemisphere 31.3
2117 Female, age 91, right hemisphere 29.6
2686 Male, age 75, right hemisphere 29.5
1938 Female, age 85, left hemisphere 28.2
1787 Male, age 76, left hemisphere 28.0
Hippocampus, CA1
nTPM: 29.9
2749 Male, age 80, left hemisphere 37.7
2527 Male, age 74, both hemispheres 30.1
2082 Female, age 91, right hemisphere 27.5
2045 Male, age 76, both hemispheres 27.2
1873 Female, age 85, both hemispheres 26.7
Hippocampus, CA2
nTPM: 29.1
1963 Male, age 80, left hemisphere 30.0
1892 Male, age 76, both hemispheres 29.8
2437 Female, age 94, left hemisphere 29.2
2249 Male, age 74, both hemispheres 28.8
2113 Female, age 91, right hemisphere 28.5
1940 Female, age 85, left hemisphere 28.3
Hippocampus, CA3
nTPM: 30.8
2137 Male, age 80, left hemisphere 33.7
2436 Male, age 74, both hemispheres 32.3
2620 Female, age 94, left hemisphere 32.3
2861 Female, age 67, both hemispheres 30.3
1867 Male, age 76, both hemispheres 29.7
1891 Female, age 85, both hemispheres 26.1
Parahippocampal cortex
nTPM: 30.0
2622 Female, age 67, right hemisphere 34.2
2018 Male, age 76, both hemispheres 31.8
2692 Male, age 74, both hemispheres 31.4
1850 Male, age 80, both hemispheres 30.3
1990 Female, age 91, right hemisphere 29.9
1933 Female, age 85, both hemispheres 29.2
2532 Female, age 72, left hemisphere 29.2
2245 Female, age 91, both hemispheres 29.1
2693 Female, age 94, both hemispheres 28.1
2250 Female, age 67, right hemisphere 26.6
Perirhinal gyrus
nTPM: 28.8
1794 Male, age 80, right hemisphere 31.9
1847 Female, age 91, left hemisphere 29.7
2521 Female, age 94, right hemisphere 28.8
2848 Male, age 76, right hemisphere 26.8
1841 Female, age 85, right hemisphere 26.5
Subiculum
nTPM: 29.0
2438 Female, age 94, left hemisphere 31.0
2042 Male, age 76, both hemispheres 30.3
1901 Male, age 80, both hemispheres 29.6
1977 Female, age 85, both hemispheres 27.9
2619 Male, age 74, both hemispheres 27.9
2729 Female, age 91, right hemisphere 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.4
Samples: 197

Max nTPM: 80.2
Min nTPM: 16.6
Std nTPM: 8.7
Median nTPM: 39.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 80.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 67.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 60.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 58.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 55.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 55.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 54.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 53.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 53.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 53.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.7
FF:10153-102I9 76 years, female 28.5
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 25.6
Min nTPM: 16.5
Sample A Female 25.6
Sample B Female 21.4
Sample C Male 20.6
Sample D Male 16.5
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 25.7
Min nTPM: 18.5
Sample A Female 20.6
Sample B Female 25.7
Sample C Male 23.3
Sample D Male 18.5
Subiculum
nTPM: 20.2
Samples: 4

Max nTPM: 25.5
Min nTPM: 16.3
Sample A Female 25.5
Sample B Female 20.0
Sample C Male 19.0
Sample D Male 16.3
Ventral hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 24.3
Min nTPM: 16.5
Sample A Female 18.3
Sample B Female 16.5
Sample C Male 24.3
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.6
Samples: 4

Max nTPM: 37.0
Min nTPM: 34.0
Sample A Male 34.0
Sample B Male 35.9
Sample C Female 35.3
Sample D Female 37.0
Hippocampal formation
nTPM: 34.5
Samples: 4

Max nTPM: 36.8
Min nTPM: 32.7
Sample A Male 32.7
Sample B Male 34.1
Sample C Female 36.8
Sample D Female 34.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
69817378 Antisense, RP_050510_03_C05, Mouse strain C57BL/6J (56 days, male) 4.2

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