HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.4 nTPM
HPA:13.4 nTPM
GTEx:9.7 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:4.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057684
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.4
Sample id Sample description nTPM
Hippocampus
nTPM: 5.8
1898 Male, age 80, left hemisphere 8.9
1855 Male, age 76, left hemisphere 6.8
2621 Female, age 67, right hemisphere 5.7
2148 Female, age 91, left hemisphere 5.0
2529 Female, age 94, left hemisphere 4.3
1911 Female, age 85, right hemisphere 4.0
Dentate gyrus
nTPM: 6.3
1927 Female, age 91, both hemispheres 7.8
2010 Male, age 76, both hemispheres 7.1
2246 Female, age 85, both hemispheres 6.3
2531 Female, age 67, both hemispheres 6.2
2530 Female, age 94, left hemisphere 5.4
2528 Male, age 74, both hemispheres 4.7
Entorhinal gyrus
nTPM: 8.3
1938 Female, age 85, left hemisphere 10.6
2764 Male, age 80, right hemisphere 10.1
2613 Female, age 94, left hemisphere 9.1
1787 Male, age 76, left hemisphere 7.9
2686 Male, age 75, right hemisphere 7.5
2117 Female, age 91, right hemisphere 4.7
Hippocampus, CA1
nTPM: 6.7
2045 Male, age 76, both hemispheres 8.0
2749 Male, age 80, left hemisphere 7.6
1873 Female, age 85, both hemispheres 6.7
2082 Female, age 91, right hemisphere 5.7
2527 Male, age 74, both hemispheres 5.4
Hippocampus, CA2
nTPM: 6.3
1892 Male, age 76, both hemispheres 9.7
1963 Male, age 80, left hemisphere 6.4
1940 Female, age 85, left hemisphere 6.1
2437 Female, age 94, left hemisphere 5.8
2113 Female, age 91, right hemisphere 5.4
2249 Male, age 74, both hemispheres 4.5
Hippocampus, CA3
nTPM: 6.4
1867 Male, age 76, both hemispheres 8.3
2861 Female, age 67, both hemispheres 7.3
2137 Male, age 80, left hemisphere 7.1
2620 Female, age 94, left hemisphere 5.5
1891 Female, age 85, both hemispheres 5.2
2436 Male, age 74, both hemispheres 5.1
Parahippocampal cortex
nTPM: 8.7
1850 Male, age 80, both hemispheres 12.9
2693 Female, age 94, both hemispheres 10.8
1933 Female, age 85, both hemispheres 10.6
2250 Female, age 67, right hemisphere 8.8
2245 Female, age 91, both hemispheres 7.8
2622 Female, age 67, right hemisphere 7.8
1990 Female, age 91, right hemisphere 7.7
2532 Female, age 72, left hemisphere 7.4
2018 Male, age 76, both hemispheres 7.3
2692 Male, age 74, both hemispheres 5.7
Perirhinal gyrus
nTPM: 13.4
1847 Female, age 91, left hemisphere 14.2
1794 Male, age 80, right hemisphere 14.1
2521 Female, age 94, right hemisphere 13.3
1841 Female, age 85, right hemisphere 12.6
2848 Male, age 76, right hemisphere 12.6
Subiculum
nTPM: 5.5
1977 Female, age 85, both hemispheres 8.0
1901 Male, age 80, both hemispheres 6.2
2438 Female, age 94, left hemisphere 5.5
2619 Male, age 74, both hemispheres 4.8
2042 Male, age 76, both hemispheres 4.3
2729 Female, age 91, right hemisphere 4.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.7
Samples: 197

Max nTPM: 42.1
Min nTPM: 0.8
Std nTPM: 6.1
Median nTPM: 8.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 33.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 26.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 26.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 25.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 25.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 22.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 21.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 21.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 21.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 21.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10153-102I9 76 years, female 16.5
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.6
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.0
Sample A Female 4.4
Sample B Female 3.5
Sample C Male 3.0
Sample D Male 3.5
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.6
Sample A Female 2.9
Sample B Female 2.6
Sample C Male 3.3
Sample D Male 2.7
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.6
Sample A Female 4.8
Sample B Female 3.9
Sample C Male 3.6
Sample D Male 3.7
Ventral hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.9
Sample A Female 4.2
Sample B Female 2.9
Sample C Male 3.5
Sample D Male 3.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.