HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:47.6 nTPM
HPA:47.6 nTPM
GTEx:88.2 nTPM
FANTOM5:95.6 Scaled Tags Per Million
Pig:57.2 nTPM
Mouse:78.9 nTPM
Allen mouse:10.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044037
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.6
Sample id Sample description nTPM
Hippocampus
nTPM: 47.2
2621 Female, age 67, right hemisphere 58.3
2529 Female, age 94, left hemisphere 51.9
2148 Female, age 91, left hemisphere 51.8
1911 Female, age 85, right hemisphere 42.9
1898 Male, age 80, left hemisphere 40.2
1855 Male, age 76, left hemisphere 38.0
Dentate gyrus
nTPM: 42.6
2531 Female, age 67, both hemispheres 58.7
1927 Female, age 91, both hemispheres 44.3
2530 Female, age 94, left hemisphere 44.0
2528 Male, age 74, both hemispheres 39.1
2246 Female, age 85, both hemispheres 35.7
2010 Male, age 76, both hemispheres 34.1
Entorhinal gyrus
nTPM: 47.6
2613 Female, age 94, left hemisphere 54.3
2686 Male, age 75, right hemisphere 53.2
2764 Male, age 80, right hemisphere 50.1
1787 Male, age 76, left hemisphere 45.0
2117 Female, age 91, right hemisphere 42.5
1938 Female, age 85, left hemisphere 40.5
Hippocampus, CA1
nTPM: 40.2
2527 Male, age 74, both hemispheres 43.8
2082 Female, age 91, right hemisphere 41.3
2749 Male, age 80, left hemisphere 39.2
1873 Female, age 85, both hemispheres 38.4
2045 Male, age 76, both hemispheres 38.0
Hippocampus, CA2
nTPM: 42.0
1963 Male, age 80, left hemisphere 50.8
2437 Female, age 94, left hemisphere 46.9
2113 Female, age 91, right hemisphere 44.3
1940 Female, age 85, left hemisphere 38.4
1892 Male, age 76, both hemispheres 36.8
2249 Male, age 74, both hemispheres 34.6
Hippocampus, CA3
nTPM: 44.7
2861 Female, age 67, both hemispheres 64.2
2620 Female, age 94, left hemisphere 54.3
2137 Male, age 80, left hemisphere 39.9
1867 Male, age 76, both hemispheres 37.4
1891 Female, age 85, both hemispheres 36.4
2436 Male, age 74, both hemispheres 36.2
Parahippocampal cortex
nTPM: 45.3
2622 Female, age 67, right hemisphere 56.9
2245 Female, age 91, both hemispheres 56.0
2693 Female, age 94, both hemispheres 46.7
2250 Female, age 67, right hemisphere 45.8
2532 Female, age 72, left hemisphere 44.6
1933 Female, age 85, both hemispheres 42.7
2692 Male, age 74, both hemispheres 42.1
1990 Female, age 91, right hemisphere 41.7
2018 Male, age 76, both hemispheres 39.3
1850 Male, age 80, both hemispheres 36.7
Perirhinal gyrus
nTPM: 43.9
2521 Female, age 94, right hemisphere 48.8
1847 Female, age 91, left hemisphere 44.9
1794 Male, age 80, right hemisphere 43.3
1841 Female, age 85, right hemisphere 42.4
2848 Male, age 76, right hemisphere 40.3
Subiculum
nTPM: 40.9
2619 Male, age 74, both hemispheres 46.4
2729 Female, age 91, right hemisphere 44.2
1977 Female, age 85, both hemispheres 43.5
2438 Female, age 94, left hemisphere 39.7
1901 Male, age 80, both hemispheres 37.1
2042 Male, age 76, both hemispheres 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.2
Samples: 197

Max nTPM: 196.8
Min nTPM: 28.8
Std nTPM: 26.8
Median nTPM: 83.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 196.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 176.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 171.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 160.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 146.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 145.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 140.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 139.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 137.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 137.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 136.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.6
FF:10153-102I9 76 years, female 110.6
FF:10169-103B7 60 years, female 80.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.3
Samples: 4

Max nTPM: 69.4
Min nTPM: 42.3
Sample A Female 69.4
Sample B Female 58.0
Sample C Male 51.4
Sample D Male 42.3
Entorhinal cortex
nTPM: 57.1
Samples: 4

Max nTPM: 68.5
Min nTPM: 46.1
Sample A Female 57.6
Sample B Female 56.3
Sample C Male 68.5
Sample D Male 46.1
Subiculum
nTPM: 48.0
Samples: 4

Max nTPM: 66.4
Min nTPM: 37.8
Sample A Female 66.4
Sample B Female 41.7
Sample C Male 46.0
Sample D Male 37.8
Ventral hippocampus
nTPM: 54.8
Samples: 4

Max nTPM: 66.4
Min nTPM: 38.8
Sample A Female 48.4
Sample B Female 38.8
Sample C Male 65.4
Sample D Male 66.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.9
Samples: 4

Max nTPM: 81.1
Min nTPM: 76.5
Sample A Male 79.5
Sample B Male 78.5
Sample C Female 81.1
Sample D Female 76.5
Hippocampal formation
nTPM: 72.1
Samples: 4

Max nTPM: 74.3
Min nTPM: 69.5
Sample A Male 73.5
Sample B Male 69.5
Sample C Female 71.2
Sample D Female 74.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.3
71211353 Antisense, RP_050816_01_C11, Mouse strain C57BL/6J (56 days, male) 10.3

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