HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.9 nTPM
HPA:44.9 nTPM
GTEx:48.5 nTPM
FANTOM5:72.1 Scaled Tags Per Million
Pig:45.7 nTPM
Mouse:87.1 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053588
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.9
Sample id Sample description nTPM
Hippocampus
nTPM: 41.2
1898 Male, age 80, left hemisphere 43.5
1911 Female, age 85, right hemisphere 41.6
2621 Female, age 67, right hemisphere 41.5
2529 Female, age 94, left hemisphere 40.9
1855 Male, age 76, left hemisphere 40.2
2148 Female, age 91, left hemisphere 39.8
Dentate gyrus
nTPM: 38.9
2246 Female, age 85, both hemispheres 41.6
2010 Male, age 76, both hemispheres 41.4
1927 Female, age 91, both hemispheres 41.2
2530 Female, age 94, left hemisphere 38.0
2528 Male, age 74, both hemispheres 36.4
2531 Female, age 67, both hemispheres 34.9
Entorhinal gyrus
nTPM: 40.1
1787 Male, age 76, left hemisphere 45.3
1938 Female, age 85, left hemisphere 42.9
2613 Female, age 94, left hemisphere 39.2
2117 Female, age 91, right hemisphere 38.0
2764 Male, age 80, right hemisphere 37.8
2686 Male, age 75, right hemisphere 37.2
Hippocampus, CA1
nTPM: 41.3
2045 Male, age 76, both hemispheres 46.9
2749 Male, age 80, left hemisphere 43.3
1873 Female, age 85, both hemispheres 39.8
2527 Male, age 74, both hemispheres 39.1
2082 Female, age 91, right hemisphere 37.6
Hippocampus, CA2
nTPM: 40.4
1892 Male, age 76, both hemispheres 44.5
1940 Female, age 85, left hemisphere 43.4
2249 Male, age 74, both hemispheres 41.0
2113 Female, age 91, right hemisphere 38.5
1963 Male, age 80, left hemisphere 38.4
2437 Female, age 94, left hemisphere 36.8
Hippocampus, CA3
nTPM: 41.0
1867 Male, age 76, both hemispheres 46.8
2436 Male, age 74, both hemispheres 43.9
2137 Male, age 80, left hemisphere 42.4
1891 Female, age 85, both hemispheres 42.0
2620 Female, age 94, left hemisphere 35.4
2861 Female, age 67, both hemispheres 35.2
Parahippocampal cortex
nTPM: 40.9
1850 Male, age 80, both hemispheres 45.2
2250 Female, age 67, right hemisphere 43.9
2018 Male, age 76, both hemispheres 43.1
1933 Female, age 85, both hemispheres 42.9
2693 Female, age 94, both hemispheres 41.1
1990 Female, age 91, right hemisphere 40.5
2245 Female, age 91, both hemispheres 39.3
2532 Female, age 72, left hemisphere 38.5
2622 Female, age 67, right hemisphere 38.2
2692 Male, age 74, both hemispheres 35.8
Perirhinal gyrus
nTPM: 44.9
1841 Female, age 85, right hemisphere 45.9
1847 Female, age 91, left hemisphere 45.8
1794 Male, age 80, right hemisphere 44.9
2848 Male, age 76, right hemisphere 44.6
2521 Female, age 94, right hemisphere 43.4
Subiculum
nTPM: 39.6
1977 Female, age 85, both hemispheres 42.1
2729 Female, age 91, right hemisphere 41.1
1901 Male, age 80, both hemispheres 39.3
2438 Female, age 94, left hemisphere 39.2
2619 Male, age 74, both hemispheres 38.1
2042 Male, age 76, both hemispheres 37.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.5
Samples: 197

Max nTPM: 118.1
Min nTPM: 27.3
Std nTPM: 13.0
Median nTPM: 46.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 118.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 96.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 81.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 78.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 77.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 75.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 71.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 71.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 70.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 70.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 70.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.1
FF:10153-102I9 76 years, female 74.2
FF:10169-103B7 60 years, female 70.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.4
Samples: 4

Max nTPM: 44.0
Min nTPM: 29.2
Sample A Female 44.0
Sample B Female 36.5
Sample C Male 39.9
Sample D Male 29.2
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 61.0
Min nTPM: 33.7
Sample A Female 40.7
Sample B Female 61.0
Sample C Male 47.3
Sample D Male 33.7
Subiculum
nTPM: 34.6
Samples: 4

Max nTPM: 46.5
Min nTPM: 26.6
Sample A Female 46.5
Sample B Female 34.6
Sample C Male 26.6
Sample D Male 30.7
Ventral hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 32.2
Min nTPM: 30.7
Sample A Female 31.4
Sample B Female 30.7
Sample C Male 32.2
Sample D Male 30.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.1
Samples: 4

Max nTPM: 91.6
Min nTPM: 83.6
Sample A Male 85.6
Sample B Male 91.6
Sample C Female 87.7
Sample D Female 83.6
Hippocampal formation
nTPM: 83.1
Samples: 4

Max nTPM: 89.9
Min nTPM: 76.6
Sample A Male 89.9
Sample B Male 81.6
Sample C Female 84.1
Sample D Female 76.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69838751 Antisense, RP_050321_04_F06, Mouse strain C57BL/6J (56 days, male) 2.4

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