HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:102.5 nTPM
HPA:102.5 nTPM
GTEx:86.2 nTPM
FANTOM5:142.4 Scaled Tags Per Million
Pig:77.5 nTPM
Mouse:97.6 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002462Antibody HPA009650Antibody CAB005077
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedHighNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.5
Sample id Sample description nTPM
Hippocampus
nTPM: 88.2
1898 Male, age 80, left hemisphere 105.6
2621 Female, age 67, right hemisphere 95.4
2148 Female, age 91, left hemisphere 94.0
2529 Female, age 94, left hemisphere 81.7
1855 Male, age 76, left hemisphere 80.3
1911 Female, age 85, right hemisphere 72.1
Dentate gyrus
nTPM: 91.5
1927 Female, age 91, both hemispheres 103.3
2530 Female, age 94, left hemisphere 99.4
2528 Male, age 74, both hemispheres 93.5
2010 Male, age 76, both hemispheres 91.5
2531 Female, age 67, both hemispheres 82.5
2246 Female, age 85, both hemispheres 78.7
Entorhinal gyrus
nTPM: 95.2
2613 Female, age 94, left hemisphere 118.5
2764 Male, age 80, right hemisphere 105.5
1938 Female, age 85, left hemisphere 93.0
1787 Male, age 76, left hemisphere 92.7
2686 Male, age 75, right hemisphere 86.0
2117 Female, age 91, right hemisphere 75.3
Hippocampus, CA1
nTPM: 92.9
2749 Male, age 80, left hemisphere 122.0
1873 Female, age 85, both hemispheres 94.2
2527 Male, age 74, both hemispheres 90.7
2082 Female, age 91, right hemisphere 82.5
2045 Male, age 76, both hemispheres 75.2
Hippocampus, CA2
nTPM: 95.0
1892 Male, age 76, both hemispheres 109.6
1963 Male, age 80, left hemisphere 106.6
2437 Female, age 94, left hemisphere 98.4
2249 Male, age 74, both hemispheres 96.1
2113 Female, age 91, right hemisphere 82.1
1940 Female, age 85, left hemisphere 76.9
Hippocampus, CA3
nTPM: 95.3
2436 Male, age 74, both hemispheres 119.6
2620 Female, age 94, left hemisphere 98.1
2137 Male, age 80, left hemisphere 93.9
1867 Male, age 76, both hemispheres 93.8
2861 Female, age 67, both hemispheres 89.0
1891 Female, age 85, both hemispheres 77.3
Parahippocampal cortex
nTPM: 92.5
1850 Male, age 80, both hemispheres 113.9
1990 Female, age 91, right hemisphere 103.3
2693 Female, age 94, both hemispheres 93.3
1933 Female, age 85, both hemispheres 93.2
2622 Female, age 67, right hemisphere 91.5
2245 Female, age 91, both hemispheres 91.3
2250 Female, age 67, right hemisphere 88.3
2692 Male, age 74, both hemispheres 88.1
2532 Female, age 72, left hemisphere 87.7
2018 Male, age 76, both hemispheres 74.7
Perirhinal gyrus
nTPM: 102.5
1847 Female, age 91, left hemisphere 123.9
1794 Male, age 80, right hemisphere 108.2
1841 Female, age 85, right hemisphere 100.7
2521 Female, age 94, right hemisphere 93.0
2848 Male, age 76, right hemisphere 86.4
Subiculum
nTPM: 85.9
2438 Female, age 94, left hemisphere 95.3
1901 Male, age 80, both hemispheres 90.0
1977 Female, age 85, both hemispheres 89.7
2619 Male, age 74, both hemispheres 89.2
2729 Female, age 91, right hemisphere 79.8
2042 Male, age 76, both hemispheres 71.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 86.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.2
Samples: 197

Max nTPM: 235.8
Min nTPM: 26.1
Std nTPM: 40.2
Median nTPM: 73.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 235.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 205.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 186.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 185.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 185.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 178.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 175.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 174.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 165.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 164.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 142.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 142.4
FF:10169-103B7 60 years, female 202.9
FF:10153-102I9 76 years, female 81.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.6
Samples: 4

Max nTPM: 103.9
Min nTPM: 53.2
Sample A Female 103.9
Sample B Female 86.3
Sample C Male 53.2
Sample D Male 66.8
Entorhinal cortex
nTPM: 62.8
Samples: 4

Max nTPM: 70.2
Min nTPM: 56.5
Sample A Female 70.2
Sample B Female 67.5
Sample C Male 57.0
Sample D Male 56.5
Subiculum
nTPM: 59.3
Samples: 4

Max nTPM: 80.5
Min nTPM: 50.0
Sample A Female 80.5
Sample B Female 50.0
Sample C Male 55.3
Sample D Male 51.3
Ventral hippocampus
nTPM: 71.6
Samples: 4

Max nTPM: 86.3
Min nTPM: 48.4
Sample A Female 86.3
Sample B Female 48.4
Sample C Male 79.5
Sample D Male 72.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.1
Samples: 4

Max nTPM: 86.1
Min nTPM: 69.8
Sample A Male 75.5
Sample B Male 69.8
Sample C Female 84.8
Sample D Female 86.1
Hippocampal formation
nTPM: 97.6
Samples: 4

Max nTPM: 111.3
Min nTPM: 84.0
Sample A Male 84.0
Sample B Male 94.0
Sample C Female 111.3
Sample D Female 101.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
69526671 Antisense, RP_050421_01_D04, Mouse strain C57BL/6J (56 days, male) 11.1
77332100 Antisense, RP_070116_02_B01, Mouse strain C57BL/6J (56 days, male) 5.1

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The Human Protein Atlas

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