HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.8 nTPM
HPA:25.8 nTPM
GTEx:27.1 nTPM
FANTOM5:50.3 Scaled Tags Per Million
Pig:24.6 nTPM
Mouse:36.7 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023447Antibody HPA023571Antibody HPA025941
Glial cells Not detectedNot detectedLow
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.6
1898 Male, age 80, left hemisphere 26.4
2529 Female, age 94, left hemisphere 26.2
2148 Female, age 91, left hemisphere 25.6
2621 Female, age 67, right hemisphere 25.1
1911 Female, age 85, right hemisphere 22.4
1855 Male, age 76, left hemisphere 22.0
Dentate gyrus
nTPM: 23.7
2530 Female, age 94, left hemisphere 26.8
2531 Female, age 67, both hemispheres 25.0
2010 Male, age 76, both hemispheres 23.2
2246 Female, age 85, both hemispheres 22.8
1927 Female, age 91, both hemispheres 22.2
2528 Male, age 74, both hemispheres 22.1
Entorhinal gyrus
nTPM: 24.9
2686 Male, age 75, right hemisphere 26.6
1787 Male, age 76, left hemisphere 25.5
2764 Male, age 80, right hemisphere 25.0
1938 Female, age 85, left hemisphere 24.8
2117 Female, age 91, right hemisphere 24.3
2613 Female, age 94, left hemisphere 23.1
Hippocampus, CA1
nTPM: 24.5
2749 Male, age 80, left hemisphere 27.6
2527 Male, age 74, both hemispheres 25.8
1873 Female, age 85, both hemispheres 24.8
2045 Male, age 76, both hemispheres 22.3
2082 Female, age 91, right hemisphere 21.7
Hippocampus, CA2
nTPM: 24.6
1892 Male, age 76, both hemispheres 27.4
1963 Male, age 80, left hemisphere 26.0
1940 Female, age 85, left hemisphere 24.2
2437 Female, age 94, left hemisphere 24.1
2249 Male, age 74, both hemispheres 23.1
2113 Female, age 91, right hemisphere 23.0
Hippocampus, CA3
nTPM: 23.8
2137 Male, age 80, left hemisphere 25.5
1867 Male, age 76, both hemispheres 25.4
1891 Female, age 85, both hemispheres 24.7
2861 Female, age 67, both hemispheres 24.5
2620 Female, age 94, left hemisphere 22.2
2436 Male, age 74, both hemispheres 20.7
Parahippocampal cortex
nTPM: 24.1
1850 Male, age 80, both hemispheres 28.7
2245 Female, age 91, both hemispheres 25.4
2532 Female, age 72, left hemisphere 24.7
2692 Male, age 74, both hemispheres 24.0
2622 Female, age 67, right hemisphere 23.6
2018 Male, age 76, both hemispheres 23.5
1933 Female, age 85, both hemispheres 23.4
1990 Female, age 91, right hemisphere 23.2
2250 Female, age 67, right hemisphere 22.2
2693 Female, age 94, both hemispheres 22.0
Perirhinal gyrus
nTPM: 25.8
1794 Male, age 80, right hemisphere 29.7
1841 Female, age 85, right hemisphere 26.4
1847 Female, age 91, left hemisphere 25.5
2848 Male, age 76, right hemisphere 25.4
2521 Female, age 94, right hemisphere 21.8
Subiculum
nTPM: 24.5
2438 Female, age 94, left hemisphere 29.5
1901 Male, age 80, both hemispheres 25.3
1977 Female, age 85, both hemispheres 24.0
2619 Male, age 74, both hemispheres 23.1
2042 Male, age 76, both hemispheres 22.8
2729 Female, age 91, right hemisphere 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.1
Samples: 197

Max nTPM: 44.9
Min nTPM: 10.8
Std nTPM: 5.8
Median nTPM: 27.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 44.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 44.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 39.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 39.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 38.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 38.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 38.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 37.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 36.9
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 36.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.3
FF:10169-103B7 60 years, female 53.3
FF:10153-102I9 76 years, female 47.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 27.9
Min nTPM: 21.3
Sample A Female 27.9
Sample B Female 24.5
Sample C Male 24.6
Sample D Male 21.3
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 22.5
Min nTPM: 17.7
Sample A Female 21.1
Sample B Female 22.5
Sample C Male 20.3
Sample D Male 17.7
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 26.0
Min nTPM: 18.9
Sample A Female 26.0
Sample B Female 20.1
Sample C Male 21.1
Sample D Male 18.9
Ventral hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 25.7
Min nTPM: 19.3
Sample A Female 22.1
Sample B Female 19.3
Sample C Male 24.0
Sample D Male 25.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 40.2
Min nTPM: 34.4
Sample A Male 35.7
Sample B Male 34.4
Sample C Female 34.4
Sample D Female 40.2
Hippocampal formation
nTPM: 36.7
Samples: 4

Max nTPM: 38.8
Min nTPM: 33.3
Sample A Male 36.0
Sample B Male 38.8
Sample C Female 38.8
Sample D Female 33.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
81600130 Antisense, RP_080312_02_F06, Mouse strain C57BL/6J (56 days, male) 10.0
69626754 Antisense, RP_050428_01_C06, Mouse strain C57BL/6J (56 days, male) 5.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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