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RPL23A
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  • RPL23A
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:654.3 nTPM
HPA:654.3 nTPM
GTEx:1211.5 nTPM
FANTOM5:13.1 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 654.3
Sample id Sample description nTPM
Amygdala
nTPM: 652.1
2695 Female, age 67, right hemisphere 681.2
2514 Male, age 75, right hemisphere 662.6
2517 Female, age 94, left hemisphere 645.0
2814 Male, age 76, right hemisphere 639.6
1987 Female, age 91, left hemisphere 632.1
Basal amygdala
nTPM: 624.0
2827 Female, age 67, right hemisphere 671.4
2609 Male, age 75, right hemisphere 638.6
2110 Male, age 80, left hemisphere 627.5
2685 Female, age 94, left hemisphere 610.5
1955 Male, age 76, both hemispheres 602.4
2243 Female, age 91, right hemisphere 593.7
Central amygdala
nTPM: 645.7
2826 Female, age 94, left hemisphere 727.3
2515 Male, age 75, right hemisphere 659.2
1905 Male, age 76, both hemispheres 621.2
2239 Male, age 80, left hemisphere 615.7
2701 Female, age 91, right hemisphere 605.0
Corticomedial amygdala
nTPM: 620.0
2428 Male, age 75, right hemisphere 644.9
2829 Male, age 80, left hemisphere 630.0
2535 Female, age 67, right hemisphere 617.5
2429 Female, age 94, left hemisphere 615.7
2240 Male, age 76, both hemispheres 606.5
2242 Female, age 91, right hemisphere 605.2
Lateral amygdala
nTPM: 654.3
2830 Female, age 67, right hemisphere 716.7
2516 Male, age 75, right hemisphere 698.7
2534 Female, age 94, left hemisphere 666.4
2256 Male, age 80, left hemisphere 629.4
1883 Male, age 76, both hemispheres 609.2
2255 Female, age 91, right hemisphere 605.1
Stria terminalis, bed nucleus
nTPM: 599.6
1974 Female, age 91, both hemispheres 616.3
2201 Male, age 74, unknown 600.3
2486 Female, age 94, both hemispheres 582.3

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1211.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1211.5
Samples: 152

Max nTPM: 3748.5
Min nTPM: 573.1
Std nTPM: 500.4
Median nTPM: 1095.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 3748.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 3112.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 3101.8
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 2969.6
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2391.3
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2308.1
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 2118.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 2101.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2055.5
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2026.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1988.0
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1985.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1975.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1927.1
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1834.9
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1830.4
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1775.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1766.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1758.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1716.5
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1690.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1670.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1628.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1613.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1556.3
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1542.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1527.2
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1523.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1481.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1468.8
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1454.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1448.2
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1439.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1415.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1397.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1394.6
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1374.8
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1348.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1329.6
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1306.9
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1294.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1294.0
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1291.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1290.6
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1289.1
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1283.6
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1270.5
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1257.5
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1256.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1250.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1248.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1245.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1236.8
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1235.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1234.6
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1227.2
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1223.9
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1212.1
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1199.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1198.8
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1179.7
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1166.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1159.0
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1157.8
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1153.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1153.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1147.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1144.8
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1136.1
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1124.8
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1120.7
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1114.6
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1109.8
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1106.1
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1104.4
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1102.3
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1089.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1081.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1080.7
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1075.6
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1065.0
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1064.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1062.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1059.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1042.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1035.5
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1029.4
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1025.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1024.9
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1019.2
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 995.2
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 990.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 989.4
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 982.5
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 980.5
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 975.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 973.9
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 966.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 961.2
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 959.4
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 955.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 951.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 941.9
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 936.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 934.7
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 933.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 931.7
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 919.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 918.5
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 913.4
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 901.0
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 899.5
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 899.3
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 897.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 887.0
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 879.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 875.2
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 874.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 872.7
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 859.6
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 857.0
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 847.8
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 843.9
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 837.3
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 832.9
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 828.0
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 826.0
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 824.8
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 824.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 819.5
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 814.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 812.3
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 797.5
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 787.4
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 779.3
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 776.7
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 772.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 771.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 771.3
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 749.5
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 742.7
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 725.2
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 725.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 722.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 710.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 673.6
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 625.7
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 617.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 615.6
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 614.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 592.0
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 573.1
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 13.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 13.1
FF:10151-102I7 76 years, female 13.1

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