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RPL23A
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:679.4 nTPM
HPA:679.4 nTPM
FANTOM5:11.5 Scaled Tags Per Million

PONS - HPA Brain RNA-seq
Max nTPM 679.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 646.4
2090 Male, age 80, both hemispheres 673.0
2188 Female, age 91, both hemispheres 662.4
1984 Male, age 76, both hemispheres 631.0
2301 Female, age 85, both hemispheres 619.1
Dorsal cochlear nucleus
nTPM: 655.1
2802 Male, age 74, right hemisphere 679.0
2187 Female, age 91, both hemispheres 659.7
2370 Male, age 61, both hemispheres 650.8
2378 Male, age 80, both hemispheres 649.3
2058 Male, age 76, both hemispheres 636.9
Dorsal tegmental nucleus
nTPM: 641.5
2083 Male, age 80, both hemispheres 677.2
2326 Male, age 74, both hemispheres 673.5
1936 Male, age 76, left hemisphere 618.5
2358 Male, age 61, both hemispheres 596.7
Dorsolateral tegmental area
nTPM: 652.7
2654 Male, age 80, both hemispheres 697.8
2751 Female, age 85, both hemispheres 664.2
2337 Male, age 61, both hemispheres 646.5
2360 Male, age 74, both hemispheres 635.9
2141 Male, age 76, both hemispheres 619.0
Kolliker-Fuse nucleus
nTPM: 639.7
2315 Male, age 76, right hemisphere 672.7
2163 Male, age 80, both hemispheres 623.7
2793 Female, age 91, left hemisphere 622.7
Lateral lemniscal nuclei
nTPM: 621.1
2320 Female, age 91, left hemisphere 632.2
2036 Male, age 80, both hemispheres 623.9
2453 Male, age 74, right hemisphere 617.8
2169 Male, age 76, both hemispheres 616.9
2746 Female, age 85, left hemisphere 615.0
Lateral parabrachial nucleus
nTPM: 648.0
2792 Male, age 76, both hemispheres 672.2
2013 Male, age 80, both hemispheres 651.0
2139 Female, age 85, right hemisphere 641.4
2790 Male, age 61, both hemispheres 627.5
Lateral vestibular nucleus
nTPM: 635.2
2311 Male, age 80, both hemispheres 650.7
2184 Male, age 76, both hemispheres 619.6
Locus coeruleus
nTPM: 627.8
2123 Female, age 91, both hemispheres 642.0
2317 Female, age 72, unknown 640.6
2162 Male, age 80, both hemispheres 633.5
2014 Male, age 55, unknown 625.2
2720 Male, age 74, both hemispheres 621.5
2788 Male, age 74, unknown 621.2
1980 Male, age 76, both hemispheres 610.8
Medial olivary nucleus
nTPM: 679.4
1943 Male, age 61, both hemispheres 696.6
2138 Female, age 91, both hemispheres 692.4
1962 Male, age 76, both hemispheres 691.2
2851 Male, age 80, both hemispheres 637.2
Medial parabrachial nucleus
nTPM: 641.4
2170 Female, age 91, both hemispheres 667.7
2463 Female, age 85, right hemisphere 654.5
2156 Male, age 61, both hemispheres 633.4
2786 Male, age 76, both hemispheres 632.5
2854 Male, age 80, both hemispheres 618.7
Medial periolivary nuclei
nTPM: 631.0
2063 Male, age 76, both hemispheres 662.4
2081 Male, age 80, both hemispheres 641.3
2791 Male, age 74, right hemisphere 627.0
2458 Female, age 91, both hemispheres 620.9
2171 Female, age 85, both hemispheres 603.5
Motor facial nucleus
nTPM: 627.2
2126 Male, age 61, both hemispheres 654.5
2062 Male, age 76, both hemispheres 644.4
2795 Female, age 91, both hemispheres 635.8
2365 Male, age 74, right hemisphere 619.8
2697 Female, age 85, both hemispheres 605.3
2327 Male, age 80, both hemispheres 603.0
Motor trigeminal nucleus
nTPM: 637.1
2309 Male, age 76, both hemispheres 645.4
2335 Male, age 61, both hemispheres 638.8
2321 Female, age 91, both hemispheres 637.5
2560 Male, age 74, both hemispheres 632.1
2079 Male, age 80, both hemispheres 632.0
Nuclei of the trapezoid body
nTPM: 632.2
1983 Male, age 76, both hemispheres 684.2
2166 Male, age 80, both hemispheres 625.2
2368 Female, age 91, both hemispheres 623.7
2159 Male, age 61, both hemispheres 622.8
2735 Female, age 85, both hemispheres 605.3
Paramedian reticular nucleus
nTPM: 645.8
2057 Male, age 80, both hemispheres 662.8
2313 Male, age 61, both hemispheres 654.3
2052 Male, age 76, both hemispheres 649.6
2050 Female, age 85, both hemispheres 616.4
Pontine nuclei
nTPM: 637.1
2319 Female, age 91, both hemispheres 663.2
2454 Male, age 74, left hemisphere 644.4
1968 Male, age 76, left hemisphere 640.3
2109 Female, age 72, unknown 639.5
2115 Male, age 80, left hemisphere 638.8
1863 Male, age 55, unknown 629.5
2727 Male, age 61, right hemisphere 625.1
2787 Female, age 85, both hemispheres 616.1
Pontine raphe nucleus
nTPM: 631.6
2853 Male, age 76, midline 631.9
2122 Female, age 85, midline 631.4
Posteroventral cochlear nucleus
nTPM: 675.4
2135 Female, age 91, both hemispheres 712.6
2341 Male, age 80, both hemispheres 703.6
2371 Male, age 61, both hemispheres 662.2
2070 Male, age 76, both hemispheres 656.3
2752 Female, age 85, both hemispheres 642.3
Principal sensory trigeminal nucleus
nTPM: 621.2
2367 Female, age 91, left hemisphere 633.7
2158 Male, age 61, both hemispheres 623.9
2324 Male, age 76, both hemispheres 622.3
2008 Male, age 80, left hemisphere 605.1
Reticular pontine nucleus, caudal
nTPM: 643.1
2559 Male, age 74, both hemispheres 658.7
2092 Male, age 76, both hemispheres 656.6
2457 Female, age 91, both hemispheres 654.8
2332 Male, age 80, right hemisphere 602.3
Reticular pontine nucleus, oral
nTPM: 640.2
2366 Female, age 91, both hemispheres 653.8
2361 Male, age 74, both hemispheres 648.6
1939 Male, age 80, both hemispheres 643.6
2167 Male, age 76, both hemispheres 639.0
2012 Female, age 85, both hemispheres 616.1
Reticulotegmental nucleus
nTPM: 639.3
2452 Male, age 74, both hemispheres 656.5
2322 Female, age 91, both hemispheres 645.1
2325 Male, age 76, both hemispheres 628.9
2333 Male, age 80, both hemispheres 627.0
Spinal trigeminal nucleus, oral
nTPM: 629.0
2164 Male, age 80, both hemispheres 634.8
1978 Male, age 76, both hemispheres 630.1
2737 Female, age 85, both hemispheres 622.2
Subcoeruleus area
nTPM: 645.6
2451 Male, age 74, both hemispheres 687.7
2369 Female, age 85, left hemisphere 675.7
2323 Female, age 91, left hemisphere 624.3
2089 Male, age 76, left hemisphere 621.9
1958 Male, age 80, both hemispheres 618.6
Superior olive
nTPM: 624.2
2020 Male, age 76, both hemispheres 658.5
2561 Female, age 91, both hemispheres 623.2
2364 Male, age 74, right hemisphere 622.2
1875 Female, age 85, both hemispheres 608.6
2329 Male, age 80, right hemisphere 608.6
Superior vestibular nucleus
nTPM: 648.7
2383 Male, age 74, both hemispheres 658.0
2061 Male, age 76, both hemispheres 649.1
2015 Male, age 80, both hemispheres 638.9
Ventral periolivary nuclei
nTPM: 620.7
2023 Male, age 76, both hemispheres 654.6
2165 Male, age 80, both hemispheres 621.0
2794 Female, age 91, left hemisphere 620.8
2130 Female, age 85, both hemispheres 586.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 622.1
2456 Female, age 91, both hemispheres 634.1
2161 Male, age 80, both hemispheres 628.7
2359 Male, age 61, both hemispheres 625.4
1959 Male, age 76, both hemispheres 619.9
2449 Male, age 74, both hemispheres 619.4
2840 Female, age 85, both hemispheres 604.8

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 11.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 11.5
FF:10182-103D2 60 years, female 13.2
FF:10165-103B3 76 years, female 9.8
Pons
Scaled Tags Per Million: 8.7
FF:10033-101E6 18-54 years, mixed 8.7

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