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TPM2
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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:83.3 nTPM
HPA:83.3 nTPM
FANTOM5:12.4 Scaled Tags Per Million

THALAMUS - HPA Brain RNA-seq
Max nTPM 83.3
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 83.0
2396 Male, age 61, right hemisphere 90.5
2032 Female, age 42, unknown 79.2
2497 Male, age 66, unknown 79.2
Centromedial thalamic nucleus
nTPM: 83.3
2279 Female, age 85, left hemisphere 86.0
2401 Male, age 76, right hemisphere 80.6
Habenula
nTPM: 79.8
2252 Male, age 62, unknown 81.8
2276 Male, age 66, unknown 81.6
1957 Male, age 80, both hemispheres 78.0
2203 Male, age 61, left hemisphere 77.9
Lateral geniculate body
nTPM: 79.2
2659 Male, age 66, unknown 83.8
1953 Male, age 62, unknown 81.3
2399 Male, age 61, left hemisphere 79.2
2841 Male, age 80, both hemispheres 78.9
2857 Male, age 74, right hemisphere 78.8
2035 Female, age 72, unknown 78.0
2575 Female, age 94, right hemisphere 77.4
2106 Female, age 67, right hemisphere 76.2
Lateral thalamic nuclei
nTPM: 79.7
2661 Female, age 72, unknown 84.5
2577 Male, age 74, both hemispheres 81.0
1903 Male, age 76, left hemisphere 80.5
2573 Female, age 94, left hemisphere 77.4
2765 Female, age 67, both hemispheres 75.0
Medial dorsal thalamic nucleus
nTPM: 79.1
1930 Female, age 42, unknown 85.4
2660 Female, age 72, unknown 82.3
1859 Male, age 76, both hemispheres 80.3
2572 Female, age 94, right hemisphere 80.1
1810 Male, age 48, unknown 79.1
2492 Male, age 75, right hemisphere 78.7
2283 Male, age 80, right hemisphere 78.4
2576 Male, age 74, both hemispheres 78.2
1971 Male, age 61, right hemisphere 77.8
2039 Female, age 72, unknown 77.4
2026 Male, age 62, unknown 77.3
2498 Male, age 66, unknown 76.8
2402 Female, age 67, both hemispheres 76.6
Medial geniculate body
nTPM: 78.8
1811 Female, age 42, unknown 80.1
2207 Male, age 80, right hemisphere 80.0
2650 Female, age 94, left hemisphere 79.6
2571 Male, age 75, right hemisphere 78.5
2217 Female, age 72, unknown 78.1
2049 Male, age 76, both hemispheres 78.0
2657 Male, age 74, right hemisphere 77.2
Nucleus reuniens
nTPM: 79.0
2210 Female, age 85, left hemisphere 81.7
2205 Male, age 80, left hemisphere 78.4
2212 Female, age 67, left hemisphere 76.9
Nucleus rhomboideus
nTPM: 82.4
2213 Female, age 67, left hemisphere 85.2
2280 Female, age 85, left hemisphere 83.2
2206 Male, age 80, both hemispheres 78.9
Posterior thalamic nucleus
nTPM: 81.3
2266 Male, age 76, right hemisphere 83.2
2495 Female, age 67, right hemisphere 82.7
2649 Female, age 94, both hemispheres 79.9
2655 Male, age 74, right hemisphere 79.4
Pulvinar
nTPM: 78.8
2582 Female, age 72, unknown 82.4
2214 Male, age 76, right hemisphere 79.4
2496 Female, age 67, right hemisphere 79.2
1899 Female, age 42, unknown 79.1
1972 Male, age 62, unknown 79.0
1929 Male, age 48, unknown 78.4
2724 Male, age 74, right hemisphere 78.4
2398 Male, age 61, left hemisphere 78.1
1932 Male, age 80, right hemisphere 77.3
2499 Male, age 66, unknown 76.7
Subthalamic nucleus
nTPM: 77.2
2658 Male, age 74, both hemispheres 79.8
2216 Male, age 48, unknown 77.8
2124 Male, age 62, unknown 77.0
2406 Female, age 72, unknown 77.0
2056 Female, age 72, unknown 76.9
2275 Male, age 66, unknown 76.9
2779 Female, age 42, unknown 76.3
2282 Male, age 61, both hemispheres 75.7
Ventral posterolateral thalamic nucleus
nTPM: 81.5
2581 Female, age 72, unknown 85.6
2578 Male, age 74, both hemispheres 83.6
2570 Male, age 75, right hemisphere 82.8
2740 Male, age 76, right hemisphere 80.7
2397 Male, age 61, right hemisphere 79.7
2197 Male, age 80, both hemispheres 76.5
Ventral posteromedial thalamic nucleus
nTPM: 79.3
2653 Male, age 74, both hemispheres 83.1
2281 Male, age 75, right hemisphere 80.1
2202 Male, age 61, left hemisphere 78.1
2758 Male, age 80, both hemispheres 77.6
2127 Male, age 76, right hemisphere 77.5
Ventral thalamic nuclei
nTPM: 80.9
2858 Female, age 72, unknown 85.1
1912 Female, age 42, unknown 83.7
1860 Male, age 76, both hemispheres 81.1
2580 Male, age 66, unknown 81.0
2204 Male, age 80, both hemispheres 80.6
1845 Male, age 48, unknown 80.0
2652 Male, age 74, left hemisphere 79.6
2285 Male, age 62, unknown 79.4
2291 Female, age 72, unknown 78.0
Ventromedial nucleus
nTPM: 79.8
1822 Female, age 42, unknown 80.3
1982 Female, age 72, unknown 79.3
Zona incerta
nTPM: 80.8
2215 Male, age 66, unknown 83.6
2663 Female, age 72, unknown 83.6
2208 Male, age 80, right hemisphere 80.7
2822 Male, age 74, right hemisphere 78.5
2403 Male, age 62, unknown 77.3

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 12.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 12.4
FF:10154-103A1 76 years, female 12.4

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