COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:43.0 nTPM
HPA:43.0 nTPM
GTEx:19.7 nTPM
FANTOM5:31.1 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 43.0
overview
Male, age 54 		Colon sample 67
nTPM: 36.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 66.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 66.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 35.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 66.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 28.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 47.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 32.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 34.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 41
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 36.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 35.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 31.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 19.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 18.9
Samples: 373

Max nTPM: 38.2
Min nTPM: 8.6
Std nTPM: 3.4
Median nTPM: 18.7
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 38.2
GTEX-14E1K-1626-SM-664MO 50-59 years, male 32.7
GTEX-17KNJ-1826-SM-7LT9N 50-59 years, male 30.4
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 26.7
GTEX-1R9JW-2126-SM-E76QT 30-39 years, female 26.7
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 26.5
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 26.5
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 26.3
GTEX-1H1E6-1826-SM-A9G21 30-39 years, male 26.3
GTEX-1JMPY-1026-SM-ARZN1 30-39 years, male 26.0
GTEX-183WM-2526-SM-731BP 70-79 years, female 25.9
Show allShow less
Colon - Transverse
Average nTPM: 19.7
Samples: 406

Max nTPM: 33.9
Min nTPM: 11.7
Std nTPM: 3.4
Median nTPM: 19.2
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 33.9
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 32.1
GTEX-1RAZR-1926-SM-E6CRF 40-49 years, male 32.0
GTEX-1PIEJ-2026-SM-E6CPA 20-29 years, female 29.8
GTEX-OIZF-1426-SM-2HML2 60-69 years, male 29.2
GTEX-14JIY-3326-SM-6871E 60-69 years, male 29.0
GTEX-1F75I-2426-SM-9WPOY 40-49 years, male 28.5
GTEX-17HHE-1826-SM-79OKE 50-59 years, male 27.8
GTEX-1RAZA-1726-SM-DPS13 20-29 years, male 27.7
GTEX-139YR-2126-SM-5KM11 50-59 years, male 27.0
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 26.9
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 31.1
FF:10014-101C5 62,83,84 years, mixed 31.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.