HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:17.9 nTPM
HPA:17.9 nTPM
GTEx:13.3 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:28.4 nTPM
Mouse:46.0 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050681
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 6.9
2621 Female, age 67, right hemisphere 9.0
1898 Male, age 80, left hemisphere 7.8
2148 Female, age 91, left hemisphere 7.2
2529 Female, age 94, left hemisphere 6.9
1855 Male, age 76, left hemisphere 6.2
1911 Female, age 85, right hemisphere 4.1
Dentate gyrus
nTPM: 7.3
2246 Female, age 85, both hemispheres 10.7
2010 Male, age 76, both hemispheres 7.3
2531 Female, age 67, both hemispheres 7.3
1927 Female, age 91, both hemispheres 6.7
2528 Male, age 74, both hemispheres 6.6
2530 Female, age 94, left hemisphere 5.3
Entorhinal gyrus
nTPM: 14.9
2613 Female, age 94, left hemisphere 19.8
1787 Male, age 76, left hemisphere 16.6
2764 Male, age 80, right hemisphere 15.5
2686 Male, age 75, right hemisphere 14.8
1938 Female, age 85, left hemisphere 14.7
2117 Female, age 91, right hemisphere 8.3
Hippocampus, CA1
nTPM: 9.2
2749 Male, age 80, left hemisphere 13.9
2527 Male, age 74, both hemispheres 10.0
2082 Female, age 91, right hemisphere 9.1
2045 Male, age 76, both hemispheres 6.8
1873 Female, age 85, both hemispheres 6.4
Hippocampus, CA2
nTPM: 8.5
1940 Female, age 85, left hemisphere 11.5
1892 Male, age 76, both hemispheres 9.2
1963 Male, age 80, left hemisphere 8.5
2437 Female, age 94, left hemisphere 8.3
2113 Female, age 91, right hemisphere 8.0
2249 Male, age 74, both hemispheres 5.3
Hippocampus, CA3
nTPM: 6.9
2861 Female, age 67, both hemispheres 11.0
2137 Male, age 80, left hemisphere 8.3
1891 Female, age 85, both hemispheres 6.3
1867 Male, age 76, both hemispheres 6.0
2620 Female, age 94, left hemisphere 4.9
2436 Male, age 74, both hemispheres 4.6
Parahippocampal cortex
nTPM: 14.1
2622 Female, age 67, right hemisphere 19.5
2693 Female, age 94, both hemispheres 16.9
1850 Male, age 80, both hemispheres 16.0
2692 Male, age 74, both hemispheres 15.7
1933 Female, age 85, both hemispheres 14.2
1990 Female, age 91, right hemisphere 13.9
2532 Female, age 72, left hemisphere 13.0
2245 Female, age 91, both hemispheres 12.7
2250 Female, age 67, right hemisphere 11.1
2018 Male, age 76, both hemispheres 8.0
Perirhinal gyrus
nTPM: 17.9
1794 Male, age 80, right hemisphere 19.9
1847 Female, age 91, left hemisphere 19.0
2521 Female, age 94, right hemisphere 18.2
2848 Male, age 76, right hemisphere 17.0
1841 Female, age 85, right hemisphere 15.6
Subiculum
nTPM: 9.3
1977 Female, age 85, both hemispheres 13.6
2438 Female, age 94, left hemisphere 12.1
2619 Male, age 74, both hemispheres 12.0
1901 Male, age 80, both hemispheres 7.8
2729 Female, age 91, right hemisphere 5.9
2042 Male, age 76, both hemispheres 4.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.3
Samples: 197

Max nTPM: 40.1
Min nTPM: 3.2
Std nTPM: 5.7
Median nTPM: 12.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 40.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 37.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 28.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 28.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 24.3
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 24.1
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 23.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 23.4
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 22.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 22.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.2
FF:10153-102I9 76 years, female 37.9
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 31.6
Min nTPM: 11.9
Sample A Female 31.6
Sample B Female 27.1
Sample C Male 11.9
Sample D Male 18.5
Entorhinal cortex
nTPM: 28.4
Samples: 4

Max nTPM: 33.8
Min nTPM: 24.9
Sample A Female 33.8
Sample B Female 28.2
Sample C Male 26.7
Sample D Male 24.9
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 22.8
Min nTPM: 16.7
Sample A Female 22.8
Sample B Female 18.7
Sample C Male 17.8
Sample D Male 16.7
Ventral hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 24.4
Min nTPM: 15.8
Sample A Female 21.8
Sample B Female 15.8
Sample C Male 24.4
Sample D Male 17.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.0
Samples: 4

Max nTPM: 54.3
Min nTPM: 40.8
Sample A Male 40.8
Sample B Male 47.0
Sample C Female 42.0
Sample D Female 54.3
Hippocampal formation
nTPM: 42.4
Samples: 4

Max nTPM: 54.0
Min nTPM: 37.8
Sample A Male 38.5
Sample B Male 37.8
Sample C Female 54.0
Sample D Female 39.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
71249743 Antisense, RP_050414_04_H07, Mouse strain C57BL/6J (56 days, male) 8.6
69444921 Antisense, RP_050414_04_H07, Mouse strain C57BL/6J (56 days, male) 6.7

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The Human Protein Atlas

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