HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:79.3 nTPM
HPA:79.3 nTPM
GTEx:112.9 nTPM
FANTOM5:78.5 Scaled Tags Per Million
Pig:41.0 nTPM
Mouse:24.1 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030887
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.3
Sample id Sample description nTPM
Hippocampus
nTPM: 79.3
2621 Female, age 67, right hemisphere 91.6
2529 Female, age 94, left hemisphere 90.1
2148 Female, age 91, left hemisphere 82.0
1911 Female, age 85, right hemisphere 73.5
1855 Male, age 76, left hemisphere 70.8
1898 Male, age 80, left hemisphere 67.9
Dentate gyrus
nTPM: 75.0
2531 Female, age 67, both hemispheres 99.7
2530 Female, age 94, left hemisphere 76.4
1927 Female, age 91, both hemispheres 72.6
2528 Male, age 74, both hemispheres 71.9
2246 Female, age 85, both hemispheres 64.9
2010 Male, age 76, both hemispheres 64.2
Entorhinal gyrus
nTPM: 77.5
2686 Male, age 75, right hemisphere 86.4
2117 Female, age 91, right hemisphere 80.8
2764 Male, age 80, right hemisphere 77.8
2613 Female, age 94, left hemisphere 75.2
1787 Male, age 76, left hemisphere 72.8
1938 Female, age 85, left hemisphere 71.8
Hippocampus, CA1
nTPM: 67.1
2527 Male, age 74, both hemispheres 72.9
2045 Male, age 76, both hemispheres 68.4
1873 Female, age 85, both hemispheres 66.1
2082 Female, age 91, right hemisphere 65.7
2749 Male, age 80, left hemisphere 62.4
Hippocampus, CA2
nTPM: 70.8
1963 Male, age 80, left hemisphere 92.5
2113 Female, age 91, right hemisphere 73.1
2437 Female, age 94, left hemisphere 70.9
1892 Male, age 76, both hemispheres 64.3
1940 Female, age 85, left hemisphere 64.1
2249 Male, age 74, both hemispheres 59.7
Hippocampus, CA3
nTPM: 74.5
2861 Female, age 67, both hemispheres 102.2
2620 Female, age 94, left hemisphere 83.6
2137 Male, age 80, left hemisphere 72.4
1867 Male, age 76, both hemispheres 67.9
1891 Female, age 85, both hemispheres 64.0
2436 Male, age 74, both hemispheres 57.2
Parahippocampal cortex
nTPM: 74.3
2622 Female, age 67, right hemisphere 89.3
2245 Female, age 91, both hemispheres 86.0
2532 Female, age 72, left hemisphere 81.3
2250 Female, age 67, right hemisphere 71.9
2692 Male, age 74, both hemispheres 71.5
2018 Male, age 76, both hemispheres 70.9
1933 Female, age 85, both hemispheres 69.2
1990 Female, age 91, right hemisphere 69.2
2693 Female, age 94, both hemispheres 69.2
1850 Male, age 80, both hemispheres 64.2
Perirhinal gyrus
nTPM: 72.7
2848 Male, age 76, right hemisphere 82.7
1794 Male, age 80, right hemisphere 75.8
1841 Female, age 85, right hemisphere 73.5
2521 Female, age 94, right hemisphere 68.9
1847 Female, age 91, left hemisphere 62.6
Subiculum
nTPM: 68.5
2619 Male, age 74, both hemispheres 74.2
1977 Female, age 85, both hemispheres 72.6
2729 Female, age 91, right hemisphere 70.7
2438 Female, age 94, left hemisphere 67.3
2042 Male, age 76, both hemispheres 64.8
1901 Male, age 80, both hemispheres 61.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 112.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.9
Samples: 197

Max nTPM: 369.2
Min nTPM: 28.8
Std nTPM: 46.9
Median nTPM: 101.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 369.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 327.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 270.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 239.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 221.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 213.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 209.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 208.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 205.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 204.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 201.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.5
FF:10153-102I9 76 years, female 115.2
FF:10169-103B7 60 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.9
Samples: 4

Max nTPM: 49.4
Min nTPM: 27.8
Sample A Female 41.8
Sample B Female 32.4
Sample C Male 49.4
Sample D Male 27.8
Entorhinal cortex
nTPM: 41.1
Samples: 4

Max nTPM: 48.5
Min nTPM: 37.7
Sample A Female 40.1
Sample B Female 37.7
Sample C Male 48.5
Sample D Male 37.9
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 48.3
Min nTPM: 29.1
Sample A Female 48.3
Sample B Female 33.2
Sample C Male 33.3
Sample D Male 29.1
Ventral hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 44.5
Min nTPM: 27.2
Sample A Female 28.0
Sample B Female 27.2
Sample C Male 44.5
Sample D Male 38.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 26.9
Min nTPM: 22.5
Sample A Male 22.5
Sample B Male 26.9
Sample C Female 23.7
Sample D Female 23.4
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 20.6
Min nTPM: 16.9
Sample A Male 20.2
Sample B Male 20.6
Sample C Female 16.9
Sample D Female 19.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
2744 Antisense, RP_Baylor_103341, Mouse strain C57BL/6J (56 days, male) 10.4
2743 Antisense, RP_Baylor_103341, Mouse strain C57BL/6J (56 days, male) 3.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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