HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:13.9 nTPM
HPA:13.9 nTPM
GTEx:17.7 nTPM
FANTOM5:3.5 Scaled Tags Per Million
Pig:22.1 nTPM
Mouse:13.5 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
1911 Female, age 85, right hemisphere 12.8
1898 Male, age 80, left hemisphere 11.8
2621 Female, age 67, right hemisphere 11.6
2529 Female, age 94, left hemisphere 10.0
1855 Male, age 76, left hemisphere 9.6
2148 Female, age 91, left hemisphere 9.6
Dentate gyrus
nTPM: 11.2
2530 Female, age 94, left hemisphere 15.7
2010 Male, age 76, both hemispheres 12.0
2528 Male, age 74, both hemispheres 12.0
2531 Female, age 67, both hemispheres 9.7
2246 Female, age 85, both hemispheres 9.5
1927 Female, age 91, both hemispheres 8.4
Entorhinal gyrus
nTPM: 12.2
2117 Female, age 91, right hemisphere 18.1
2764 Male, age 80, right hemisphere 16.1
2613 Female, age 94, left hemisphere 10.3
1938 Female, age 85, left hemisphere 10.2
1787 Male, age 76, left hemisphere 9.6
2686 Male, age 75, right hemisphere 8.8
Hippocampus, CA1
nTPM: 10.0
1873 Female, age 85, both hemispheres 10.8
2527 Male, age 74, both hemispheres 10.8
2749 Male, age 80, left hemisphere 10.0
2082 Female, age 91, right hemisphere 9.2
2045 Male, age 76, both hemispheres 9.1
Hippocampus, CA2
nTPM: 12.2
2249 Male, age 74, both hemispheres 15.7
1963 Male, age 80, left hemisphere 15.5
2437 Female, age 94, left hemisphere 11.2
1940 Female, age 85, left hemisphere 11.0
1892 Male, age 76, both hemispheres 10.5
2113 Female, age 91, right hemisphere 9.5
Hippocampus, CA3
nTPM: 10.0
1891 Female, age 85, both hemispheres 14.2
2620 Female, age 94, left hemisphere 12.6
1867 Male, age 76, both hemispheres 11.3
2436 Male, age 74, both hemispheres 8.3
2861 Female, age 67, both hemispheres 6.8
2137 Male, age 80, left hemisphere 6.7
Parahippocampal cortex
nTPM: 9.5
2692 Male, age 74, both hemispheres 12.6
1990 Female, age 91, right hemisphere 11.8
2532 Female, age 72, left hemisphere 11.5
1850 Male, age 80, both hemispheres 9.5
1933 Female, age 85, both hemispheres 9.4
2693 Female, age 94, both hemispheres 9.1
2018 Male, age 76, both hemispheres 9.0
2245 Female, age 91, both hemispheres 8.8
2250 Female, age 67, right hemisphere 6.9
2622 Female, age 67, right hemisphere 6.6
Perirhinal gyrus
nTPM: 7.7
2521 Female, age 94, right hemisphere 8.7
2848 Male, age 76, right hemisphere 8.2
1794 Male, age 80, right hemisphere 7.9
1847 Female, age 91, left hemisphere 7.0
1841 Female, age 85, right hemisphere 6.8
Subiculum
nTPM: 13.9
2042 Male, age 76, both hemispheres 18.7
1901 Male, age 80, both hemispheres 17.5
1977 Female, age 85, both hemispheres 14.7
2619 Male, age 74, both hemispheres 12.0
2729 Female, age 91, right hemisphere 11.3
2438 Female, age 94, left hemisphere 9.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.7
Samples: 197

Max nTPM: 64.7
Min nTPM: 1.8
Std nTPM: 11.6
Median nTPM: 15.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 64.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 61.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 59.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 57.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 55.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 53.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 42.0
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 41.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 40.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 39.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 37.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 3.5
FF:10153-102I9 76 years, female 4.9
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 34.1
Min nTPM: 5.8
Sample A Female 33.9
Sample B Female 14.8
Sample C Male 34.1
Sample D Male 5.8
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 7.7
Min nTPM: 4.0
Sample A Female 4.0
Sample B Female 7.7
Sample C Male 4.1
Sample D Male 6.3
Subiculum
nTPM: 6.6
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.0
Sample A Female 6.6
Sample B Female 8.5
Sample C Male 5.0
Sample D Male 6.3
Ventral hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 19.8
Min nTPM: 5.3
Sample A Female 15.7
Sample B Female 5.3
Sample C Male 14.0
Sample D Male 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 9.2
Min nTPM: 2.0
Sample A Male 9.2
Sample B Male 6.2
Sample C Female 5.7
Sample D Female 2.0
Hippocampal formation
nTPM: 13.5
Samples: 4

Max nTPM: 19.0
Min nTPM: 8.5
Sample A Male 8.5
Sample B Male 12.2
Sample C Female 19.0
Sample D Female 14.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.