HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.1 nTPM
HPA:32.1 nTPM
GTEx:46.6 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:185.2 nTPM
Allen mouse:13.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043025Antibody HPA048638
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.1
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
2529 Female, age 94, left hemisphere 35.6
1855 Male, age 76, left hemisphere 31.5
2621 Female, age 67, right hemisphere 30.2
2148 Female, age 91, left hemisphere 29.6
1911 Female, age 85, right hemisphere 28.4
1898 Male, age 80, left hemisphere 20.9
Dentate gyrus
nTPM: 31.8
2531 Female, age 67, both hemispheres 38.5
2528 Male, age 74, both hemispheres 34.4
2246 Female, age 85, both hemispheres 34.0
2530 Female, age 94, left hemisphere 31.0
1927 Female, age 91, both hemispheres 27.9
2010 Male, age 76, both hemispheres 25.0
Entorhinal gyrus
nTPM: 31.8
2613 Female, age 94, left hemisphere 38.6
2764 Male, age 80, right hemisphere 33.6
2686 Male, age 75, right hemisphere 31.5
1787 Male, age 76, left hemisphere 31.1
2117 Female, age 91, right hemisphere 28.5
1938 Female, age 85, left hemisphere 27.5
Hippocampus, CA1
nTPM: 30.6
2045 Male, age 76, both hemispheres 34.0
2749 Male, age 80, left hemisphere 31.6
2082 Female, age 91, right hemisphere 30.3
1873 Female, age 85, both hemispheres 28.6
2527 Male, age 74, both hemispheres 28.3
Hippocampus, CA2
nTPM: 26.0
1940 Female, age 85, left hemisphere 30.1
1892 Male, age 76, both hemispheres 27.3
2249 Male, age 74, both hemispheres 26.5
1963 Male, age 80, left hemisphere 24.0
2437 Female, age 94, left hemisphere 24.0
2113 Female, age 91, right hemisphere 23.9
Hippocampus, CA3
nTPM: 31.2
2861 Female, age 67, both hemispheres 36.6
2620 Female, age 94, left hemisphere 35.6
2137 Male, age 80, left hemisphere 33.6
1867 Male, age 76, both hemispheres 29.6
1891 Female, age 85, both hemispheres 28.9
2436 Male, age 74, both hemispheres 22.8
Parahippocampal cortex
nTPM: 32.1
2245 Female, age 91, both hemispheres 37.2
2250 Female, age 67, right hemisphere 36.7
1933 Female, age 85, both hemispheres 36.6
2018 Male, age 76, both hemispheres 35.3
2532 Female, age 72, left hemisphere 34.5
2693 Female, age 94, both hemispheres 33.2
2692 Male, age 74, both hemispheres 33.0
1850 Male, age 80, both hemispheres 24.9
1990 Female, age 91, right hemisphere 24.7
2622 Female, age 67, right hemisphere 24.6
Perirhinal gyrus
nTPM: 28.1
2521 Female, age 94, right hemisphere 31.3
1841 Female, age 85, right hemisphere 29.3
2848 Male, age 76, right hemisphere 28.8
1794 Male, age 80, right hemisphere 25.8
1847 Female, age 91, left hemisphere 25.5
Subiculum
nTPM: 27.8
2042 Male, age 76, both hemispheres 35.1
1901 Male, age 80, both hemispheres 29.8
1977 Female, age 85, both hemispheres 29.2
2729 Female, age 91, right hemisphere 27.5
2619 Male, age 74, both hemispheres 26.4
2438 Female, age 94, left hemisphere 19.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.6
Samples: 197

Max nTPM: 100.4
Min nTPM: 18.4
Std nTPM: 12.7
Median nTPM: 44.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 100.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 91.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 80.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 78.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 76.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 75.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 74.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 74.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 72.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 72.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 72.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10153-102I9 76 years, female 37.4
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 24.3
Min nTPM: 17.3
Sample A Female 24.3
Sample B Female 19.0
Sample C Male 23.2
Sample D Male 17.3
Entorhinal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 31.6
Min nTPM: 28.5
Sample A Female 31.6
Sample B Female 28.5
Sample C Male 31.2
Sample D Male 29.7
Subiculum
nTPM: 22.1
Samples: 4

Max nTPM: 30.2
Min nTPM: 18.8
Sample A Female 30.2
Sample B Female 19.9
Sample C Male 18.8
Sample D Male 19.3
Ventral hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 24.5
Min nTPM: 16.8
Sample A Female 17.5
Sample B Female 16.8
Sample C Male 24.5
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 185.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.2
Samples: 4

Max nTPM: 174.1
Min nTPM: 165.7
Sample A Male 165.7
Sample B Male 167.4
Sample C Female 169.7
Sample D Female 174.1
Hippocampal formation
nTPM: 185.2
Samples: 4

Max nTPM: 193.7
Min nTPM: 173.9
Sample A Male 189.7
Sample B Male 183.3
Sample C Female 193.7
Sample D Female 173.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.8
74881890 Antisense, RP_060315_04_D10, Mouse strain C57BL/6J (56 days, male) 14.6
69530762 Antisense, RP_050421_04_E05, Mouse strain C57BL/6J (56 days, male) 13.1

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The Human Protein Atlas

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