We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MT-ND4
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • MT-ND4
BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:97098.9 nTPM
HPA:97098.9 nTPM
Pig:7378.1 nTPM
Allen mouse:5.1 Expression energy

PONS - HPA Brain RNA-seq
Max nTPM 97098.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 86189.4
2301 Female, age 85, both hemispheres 112489.4
2188 Female, age 91, both hemispheres 80523.3
1984 Male, age 76, both hemispheres 77496.1
2090 Male, age 80, both hemispheres 74248.7
Dorsal cochlear nucleus
nTPM: 87229.0
2378 Male, age 80, both hemispheres 103811.0
2802 Male, age 74, right hemisphere 91271.0
2187 Female, age 91, both hemispheres 81598.3
2058 Male, age 76, both hemispheres 79837.9
2370 Male, age 61, both hemispheres 79626.8
Dorsal tegmental nucleus
nTPM: 83710.3
2358 Male, age 61, both hemispheres 99551.0
2083 Male, age 80, both hemispheres 79189.3
1936 Male, age 76, left hemisphere 79064.8
2326 Male, age 74, both hemispheres 77036.0
Dorsolateral tegmental area
nTPM: 76153.6
2141 Male, age 76, both hemispheres 85098.4
2337 Male, age 61, both hemispheres 80960.1
2654 Male, age 80, both hemispheres 76366.9
2751 Female, age 85, both hemispheres 69712.4
2360 Male, age 74, both hemispheres 68630.0
Kolliker-Fuse nucleus
nTPM: 83389.7
2793 Female, age 91, left hemisphere 99962.9
2163 Male, age 80, both hemispheres 82186.5
2315 Male, age 76, right hemisphere 68019.6
Lateral lemniscal nuclei
nTPM: 81619.1
2320 Female, age 91, left hemisphere 96242.6
2169 Male, age 76, both hemispheres 86171.3
2453 Male, age 74, right hemisphere 85415.0
2036 Male, age 80, both hemispheres 73067.4
2746 Female, age 85, left hemisphere 67199.0
Lateral parabrachial nucleus
nTPM: 75054.8
2792 Male, age 76, both hemispheres 79748.3
2790 Male, age 61, both hemispheres 79203.0
2139 Female, age 85, right hemisphere 72162.2
2013 Male, age 80, both hemispheres 69105.8
Lateral vestibular nucleus
nTPM: 96498.1
2184 Male, age 76, both hemispheres 101481.7
2311 Male, age 80, both hemispheres 91514.5
Locus coeruleus
nTPM: 80445.7
2720 Male, age 74, both hemispheres 96417.3
2162 Male, age 80, both hemispheres 87944.5
2788 Male, age 74, unknown 81634.5
2317 Female, age 72, unknown 77714.5
1980 Male, age 76, both hemispheres 74352.6
2014 Male, age 55, unknown 74152.7
2123 Female, age 91, both hemispheres 70904.2
Medial olivary nucleus
nTPM: 74360.9
2851 Male, age 80, both hemispheres 92445.7
2138 Female, age 91, both hemispheres 71350.0
1962 Male, age 76, both hemispheres 66982.6
1943 Male, age 61, both hemispheres 66665.2
Medial parabrachial nucleus
nTPM: 78806.6
2854 Male, age 80, both hemispheres 89081.6
2786 Male, age 76, both hemispheres 84695.5
2156 Male, age 61, both hemispheres 80975.6
2170 Female, age 91, both hemispheres 74484.3
2463 Female, age 85, right hemisphere 64795.8
Medial periolivary nuclei
nTPM: 79512.9
2458 Female, age 91, both hemispheres 98349.2
2171 Female, age 85, both hemispheres 84337.9
2063 Male, age 76, both hemispheres 72603.1
2081 Male, age 80, both hemispheres 71824.1
2791 Male, age 74, right hemisphere 70450.2
Motor facial nucleus
nTPM: 92857.3
2795 Female, age 91, both hemispheres 121893.8
2327 Male, age 80, both hemispheres 108423.1
2697 Female, age 85, both hemispheres 105681.7
2365 Male, age 74, right hemisphere 75039.8
2062 Male, age 76, both hemispheres 73104.8
2126 Male, age 61, both hemispheres 73000.9
Motor trigeminal nucleus
nTPM: 84134.1
2321 Female, age 91, both hemispheres 98998.3
2335 Male, age 61, both hemispheres 82132.6
2309 Male, age 76, both hemispheres 81652.9
2560 Male, age 74, both hemispheres 81072.3
2079 Male, age 80, both hemispheres 76814.4
Nuclei of the trapezoid body
nTPM: 80624.4
2368 Female, age 91, both hemispheres 97819.7
2166 Male, age 80, both hemispheres 84463.9
1983 Male, age 76, both hemispheres 75511.0
2159 Male, age 61, both hemispheres 73402.9
2735 Female, age 85, both hemispheres 71924.7
Paramedian reticular nucleus
nTPM: 76605.9
2313 Male, age 61, both hemispheres 84146.9
2050 Female, age 85, both hemispheres 77229.9
2052 Male, age 76, both hemispheres 75937.5
2057 Male, age 80, both hemispheres 69109.3
Pontine nuclei
nTPM: 73520.9
2319 Female, age 91, both hemispheres 85256.0
2787 Female, age 85, both hemispheres 76894.0
2115 Male, age 80, left hemisphere 74557.3
2454 Male, age 74, left hemisphere 74240.3
1863 Male, age 55, unknown 72313.6
1968 Male, age 76, left hemisphere 71131.2
2109 Female, age 72, unknown 68439.5
2727 Male, age 61, right hemisphere 65335.2
Pontine raphe nucleus
nTPM: 79047.7
2853 Male, age 76, midline 83569.8
2122 Female, age 85, midline 74525.5
Posteroventral cochlear nucleus
nTPM: 76524.5
2341 Male, age 80, both hemispheres 85471.0
2371 Male, age 61, both hemispheres 81385.3
2752 Female, age 85, both hemispheres 73417.6
2135 Female, age 91, both hemispheres 72021.1
2070 Male, age 76, both hemispheres 70327.5
Principal sensory trigeminal nucleus
nTPM: 88174.2
2324 Male, age 76, both hemispheres 114258.5
2367 Female, age 91, left hemisphere 95525.1
2158 Male, age 61, both hemispheres 72562.0
2008 Male, age 80, left hemisphere 70351.4
Reticular pontine nucleus, caudal
nTPM: 87559.3
2332 Male, age 80, right hemisphere 104783.2
2457 Female, age 91, both hemispheres 96586.5
2559 Male, age 74, both hemispheres 74609.4
2092 Male, age 76, both hemispheres 74258.2
Reticular pontine nucleus, oral
nTPM: 79479.4
2366 Female, age 91, both hemispheres 101082.3
2167 Male, age 76, both hemispheres 83852.9
1939 Male, age 80, both hemispheres 72428.0
2361 Male, age 74, both hemispheres 70509.4
2012 Female, age 85, both hemispheres 69524.2
Reticulotegmental nucleus
nTPM: 97098.9
2322 Female, age 91, both hemispheres 104767.9
2333 Male, age 80, both hemispheres 102529.2
2325 Male, age 76, both hemispheres 94474.5
2452 Male, age 74, both hemispheres 86623.9
Spinal trigeminal nucleus, oral
nTPM: 82962.5
2164 Male, age 80, both hemispheres 100461.6
1978 Male, age 76, both hemispheres 76626.6
2737 Female, age 85, both hemispheres 71799.4
Subcoeruleus area
nTPM: 76384.5
2323 Female, age 91, left hemisphere 81074.6
2451 Male, age 74, both hemispheres 79703.2
1958 Male, age 80, both hemispheres 76120.5
2089 Male, age 76, left hemisphere 75546.8
2369 Female, age 85, left hemisphere 69477.6
Superior olive
nTPM: 82553.2
2561 Female, age 91, both hemispheres 103609.2
2329 Male, age 80, right hemisphere 99492.2
2020 Male, age 76, both hemispheres 70972.3
1875 Female, age 85, both hemispheres 69420.2
2364 Male, age 74, right hemisphere 69271.9
Superior vestibular nucleus
nTPM: 72662.5
2061 Male, age 76, both hemispheres 74242.0
2015 Male, age 80, both hemispheres 72398.9
2383 Male, age 74, both hemispheres 71346.7
Ventral periolivary nuclei
nTPM: 82964.3
2794 Female, age 91, left hemisphere 97792.8
2165 Male, age 80, both hemispheres 87603.6
2130 Female, age 85, both hemispheres 78579.9
2023 Male, age 76, both hemispheres 67880.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 86660.0
2456 Female, age 91, both hemispheres 95187.0
2840 Female, age 85, both hemispheres 94717.2
2359 Male, age 61, both hemispheres 89200.1
2161 Male, age 80, both hemispheres 86228.4
2449 Male, age 74, both hemispheres 77700.0
1959 Male, age 76, both hemispheres 76927.4

PONS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 7378.1
Pig sample Sample description nTPM
Pons
nTPM: 7378.2
Samples: 4

Max nTPM: 9527.6
Min nTPM: 5212.3
Sample A Female 9527.6
Sample B Female 5212.3
Sample C Male 5536.5
Sample D Male 9236.2

PONS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Pons
Expression energy: 5.1
77280559 Antisense, RP_070116_01_F10, Mouse strain C57BL/6J (56 days, male) 10.6
74076114 Antisense, RP_051219_02_G07, Mouse strain C57BL/6J (56 days, male) 4.6
74076066 Antisense, RP_051219_02_F10, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.