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L1CAM
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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: High
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: High
Processes in molecular layer: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: High
Synaptic glomeruli - core: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:141.9 nTPM
FANTOM5:228.5 Scaled Tags Per Million
Pig:59.1 nTPM
Mouse:19.1 nTPM
Allen mouse:0.7 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB010896
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil High
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer High
Processes in molecular layer Not detected
Synaptic glomeruli - capsule High
Synaptic glomeruli - core Not detected



CEREBELLUM - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 23.0
2101 Male, age 74, right hemisphere 67.3
2055 Female, age 91, right hemisphere 53.1
1774 Male, age 80, left hemisphere 34.2
1769 Male, age 76, right hemisphere 22.0
1768 Female, age 72, unknown 7.7
1788 Male, age 55, unknown 0.0
2003 Female, age 85, right hemisphere 0.0
2006 Male, age 61, right hemisphere 0.0
Cerebellar nuclei
nTPM: 0.0
1871 Male, age 74, unknown 0.0
1879 Male, age 55, unknown 0.0
1966 Female, age 91, left hemisphere 0.0
2005 Male, age 80, left hemisphere 0.0
2175 Male, age 61, right hemisphere 0.0
2177 Female, age 85, both hemispheres 0.0
2318 Male, age 74, left hemisphere 0.0
2783 Female, age 72, unknown 0.0
2882 Male, age 76, left hemisphere 0.0
Flocculonodular lobe
nTPM: 19.5
2176 Female, age 91, right hemisphere 55.2
1771 Male, age 80, left hemisphere 37.0
1767 Male, age 76, left hemisphere 26.4
1792 Male, age 74, unknown 14.8
1835 Female, age 85, right hemisphere 3.6
1765 Male, age 55, unknown 0.0
2004 Male, age 61, right hemisphere 0.0
Vermis
nTPM: 17.7
1751 Male, age 74, right hemisphere 62.9
1778 Female, age 91, left hemisphere 46.2
1770 Male, age 76, left hemisphere 22.7
1988 Female, age 85, left hemisphere 14.0
1825 Male, age 74, unknown 10.4
1928 Female, age 72, unknown 3.7
1766 Male, age 55, unknown 0.0
2460 Male, age 61, both hemispheres 0.0
2834 Male, age 80, left hemisphere 0.0

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 141.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 126.4
Samples: 215

Max nTPM: 199.9
Min nTPM: 41.6
Std nTPM: 26.3
Median nTPM: 124.3
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 199.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 198.6
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 194.3
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 191.6
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 188.9
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 188.5
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 186.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 184.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 183.3
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 179.9
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 176.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 176.2
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 173.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 170.2
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 168.4
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 167.8
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 163.8
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 162.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 161.4
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 160.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 159.1
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 158.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 157.8
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 157.7
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 157.5
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 157.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 155.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 155.0
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 154.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 154.6
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 154.4
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 154.1
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 153.2
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 151.3
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 150.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 149.3
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 148.5
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 148.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 148.0
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 148.0
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 147.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 147.7
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 145.9
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 144.5
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 144.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 144.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 143.7
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 143.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 142.8
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 142.8
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 142.3
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 142.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 141.9
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 141.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 140.9
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 140.4
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 140.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 140.0
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 140.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 139.5
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 139.2
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 138.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 138.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 137.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 137.3
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 137.0
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 136.7
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 136.5
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 136.1
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 136.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 135.8
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 135.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 134.7
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 134.7
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 134.5
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 134.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 134.3
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 133.7
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 133.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 133.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 132.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 132.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 131.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 131.8
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 131.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 131.3
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 131.0
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 130.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 129.9
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 129.8
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 129.5
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 129.0
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 128.7
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 128.7
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 128.3
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 128.2
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 128.1
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 128.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 128.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 128.0
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 127.1
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 126.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 125.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 125.6
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 125.4
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 125.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 124.8
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 124.3
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 124.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 123.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 123.5
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 123.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 122.7
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 122.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 122.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 122.2
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 122.2
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 122.1
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 122.0
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 121.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 121.4
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 121.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 120.9
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 120.6
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 120.3
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 119.9
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 119.8
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 119.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 119.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 119.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 119.0
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 119.0
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 118.9
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 118.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 118.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 118.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 116.9
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 116.8
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 116.4
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 116.2
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 116.0
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 115.9
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 115.7
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 115.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 115.3
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 115.0
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 114.4
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 114.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 114.3
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 113.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 113.5
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 113.1
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 112.4
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 112.3
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 112.0
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 111.1
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 110.5
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 110.3
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 110.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 110.2
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 110.2
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 109.6
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 109.5
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 109.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 109.2
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 109.0
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 108.1
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 108.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 107.2
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 107.1
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 106.8
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 106.7
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 106.0
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 105.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 105.4
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 105.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 104.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 104.2
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 103.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 103.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 102.6
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 102.3
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 102.0
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 100.2
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 100.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 99.8
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 99.1
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 98.3
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 96.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 96.5
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 93.8
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 93.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 93.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 92.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 92.2
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 91.9
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 91.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 91.1
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 90.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 89.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 89.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 88.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 88.5
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 87.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 87.6
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 83.1
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 82.7
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 79.3
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 78.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 76.0
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 75.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 74.4
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 72.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 71.5
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 41.6
Show allShow less
Brain - Cerebellum
Average nTPM: 141.9
Samples: 241

Max nTPM: 221.3
Min nTPM: 76.5
Std nTPM: 25.8
Median nTPM: 140.5
GTEX-X261-3126-SM-4PQZC 50-59 years, male 221.3
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 214.2
GTEX-1192X-3226-SM-5987D 50-59 years, male 208.6
GTEX-WL46-2826-SM-3LK81 50-59 years, male 206.8
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 206.5
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 202.2
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 199.8
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 195.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 190.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 188.4
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 184.9
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 183.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 183.2
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 181.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 177.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 176.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 176.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 176.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 173.8
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 173.6
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 173.5
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 173.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 173.1
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 172.6
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 172.4
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 172.0
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 171.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 171.9
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 170.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 169.9
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 169.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 169.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 168.9
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 168.3
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 167.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 167.5
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 167.4
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 167.2
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 166.8
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 166.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 166.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 165.2
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 165.1
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 164.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 163.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 163.0
GTEX-14ABY-3026-SM-664NE 50-59 years, male 163.0
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 162.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 161.9
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 161.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 161.4
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 161.2
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 161.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 160.5
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 159.9
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 159.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 159.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 159.1
GTEX-17EVP-2926-SM-793BU 40-49 years, male 159.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 158.5
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 158.1
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 158.0
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 157.9
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 157.9
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 157.6
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 157.2
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 156.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 156.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 156.4
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 156.3
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 156.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 156.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 155.4
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 155.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 155.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 154.4
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 154.3
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 153.7
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 153.5
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 152.8
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 152.6
GTEX-11EI6-2926-SM-5985U 60-69 years, male 152.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 151.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 151.8
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 151.7
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 151.4
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 151.4
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 151.2
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 151.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 150.9
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 150.7
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 150.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 150.5
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 149.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 149.0
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 148.9
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 148.8
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 148.8
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 148.2
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 148.2
GTEX-15G19-2826-SM-6M48K 60-69 years, male 148.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 147.9
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 147.3
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 147.3
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 147.2
GTEX-145LS-3026-SM-5O99S 60-69 years, female 146.9
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 145.8
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 145.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 145.3
GTEX-11NUK-3026-SM-5986K 50-59 years, male 144.5
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 144.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 144.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 144.0
GTEX-12126-0926-SM-5FQTW 20-29 years, male 143.9
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 142.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 142.4
GTEX-1B933-3026-SM-731DB 50-59 years, female 141.8
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 141.3
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 141.3
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 140.9
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 140.5
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 140.2
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 140.1
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 138.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 138.9
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 138.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 138.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 138.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 138.0
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 138.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 137.7
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 137.4
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 137.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 137.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 137.0
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 137.0
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 136.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 136.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 136.4
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 136.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 136.1
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 136.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 135.9
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 135.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 135.1
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 135.0
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 135.0
GTEX-13112-2926-SM-5DUWT 50-59 years, male 134.7
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 134.5
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 134.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 134.3
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 134.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 134.2
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 133.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 133.7
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 133.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 132.2
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 132.1
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 132.0
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 131.9
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 131.7
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 131.6
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 131.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 131.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 130.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 130.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 130.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 130.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 129.6
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 129.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 128.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 128.8
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 128.2
GTEX-11DYG-2926-SM-5H132 60-69 years, male 128.1
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 127.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 126.5
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 126.0
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 125.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 125.8
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 125.7
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 125.7
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 125.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 125.3
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 125.0
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 124.5
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 124.3
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 124.0
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 123.9
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 123.0
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 123.0
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 122.9
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 122.9
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 122.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 122.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 121.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 121.1
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 120.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 120.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 120.0
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 119.2
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 119.1
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 119.0
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 118.1
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 117.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 117.1
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 117.1
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 116.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 116.2
GTEX-18465-2926-SM-7KFSE 50-59 years, male 114.2
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 114.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 113.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 112.7
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 112.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 111.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 111.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 111.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 110.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 108.4
GTEX-144GL-2926-SM-5O99F 50-59 years, male 106.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 104.3
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 104.1
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 103.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 102.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 101.0
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 100.4
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 100.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 99.2
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 99.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 97.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 97.0
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 95.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 94.8
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 94.4
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 92.3
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 92.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 91.0
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 88.3
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 79.3
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 79.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 78.1
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 76.5
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 228.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 228.5
FF:10166-103B4 76 years, female 305.2
FF:10083-102B2 22-68 years, mixed 151.8

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 59.1
Pig sample Sample description nTPM
Cerebellum
nTPM: 59.1
Samples: 4

Max nTPM: 99.8
Min nTPM: 42.7
Sample A Female 99.8
Sample B Female 47.2
Sample C Male 42.7
Sample D Male 46.6

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 19.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 19.1
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.8
Sample A Male 19.6
Sample B Male 17.8
Sample C Female 18.9
Sample D Female 20.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.7
79591595 Antisense, RP_071204_04_D07, Mouse strain C57BL/6J (56 days, male) 1.4
620 Antisense, RP_Baylor_102880, Mouse strain C57BL/6J (56 days, male) 0.8
80342072 Antisense, RP_071204_04_D07, Mouse strain C57BL/6J (56 days, male) 0.7
621 Antisense, RP_Baylor_102880, Mouse strain C57BL/6J (56 days, male) 0.4
622 Sense, RPS_Baylor_37010, Mouse strain C57BL/6J (56 days, male) 0.0

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