HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:20.9 nTPM
FANTOM5:31.6 Scaled Tags Per Million
Pig:4.2 nTPM
Mouse:15.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076946
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
2621 Female, age 67, right hemisphere 20.3
2529 Female, age 94, left hemisphere 19.7
1898 Male, age 80, left hemisphere 19.5
1911 Female, age 85, right hemisphere 19.2
1855 Male, age 76, left hemisphere 18.9
2148 Female, age 91, left hemisphere 18.9
Dentate gyrus
nTPM: 19.3
2530 Female, age 94, left hemisphere 20.5
2531 Female, age 67, both hemispheres 20.3
2528 Male, age 74, both hemispheres 19.1
1927 Female, age 91, both hemispheres 18.7
2010 Male, age 76, both hemispheres 18.7
2246 Female, age 85, both hemispheres 18.5
Entorhinal gyrus
nTPM: 20.0
2117 Female, age 91, right hemisphere 20.7
2686 Male, age 75, right hemisphere 20.7
2764 Male, age 80, right hemisphere 20.3
2613 Female, age 94, left hemisphere 20.1
1787 Male, age 76, left hemisphere 19.3
1938 Female, age 85, left hemisphere 18.7
Hippocampus, CA1
nTPM: 19.0
2527 Male, age 74, both hemispheres 19.5
1873 Female, age 85, both hemispheres 19.2
2082 Female, age 91, right hemisphere 18.9
2749 Male, age 80, left hemisphere 18.8
2045 Male, age 76, both hemispheres 18.7
Hippocampus, CA2
nTPM: 19.9
2113 Female, age 91, right hemisphere 20.7
1963 Male, age 80, left hemisphere 20.2
2437 Female, age 94, left hemisphere 20.2
1940 Female, age 85, left hemisphere 19.6
2249 Male, age 74, both hemispheres 19.6
1892 Male, age 76, both hemispheres 18.9
Hippocampus, CA3
nTPM: 20.0
2861 Female, age 67, both hemispheres 20.9
1891 Female, age 85, both hemispheres 20.5
2620 Female, age 94, left hemisphere 20.5
1867 Male, age 76, both hemispheres 19.8
2436 Male, age 74, both hemispheres 19.6
2137 Male, age 80, left hemisphere 18.8
Parahippocampal cortex
nTPM: 19.3
2692 Male, age 74, both hemispheres 19.9
1990 Female, age 91, right hemisphere 19.8
2622 Female, age 67, right hemisphere 19.8
2693 Female, age 94, both hemispheres 19.7
1933 Female, age 85, both hemispheres 19.5
2018 Male, age 76, both hemispheres 19.5
2532 Female, age 72, left hemisphere 19.2
2250 Female, age 67, right hemisphere 19.1
1850 Male, age 80, both hemispheres 18.8
2245 Female, age 91, both hemispheres 17.6
Perirhinal gyrus
nTPM: 18.2
2848 Male, age 76, right hemisphere 18.7
1841 Female, age 85, right hemisphere 18.3
1847 Female, age 91, left hemisphere 18.2
1794 Male, age 80, right hemisphere 17.9
2521 Female, age 94, right hemisphere 17.8
Subiculum
nTPM: 19.3
2619 Male, age 74, both hemispheres 20.6
2042 Male, age 76, both hemispheres 20.2
1901 Male, age 80, both hemispheres 19.5
2729 Female, age 91, right hemisphere 19.3
1977 Female, age 85, both hemispheres 18.7
2438 Female, age 94, left hemisphere 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 40.7
Min nTPM: 11.3
Std nTPM: 4.4
Median nTPM: 20.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 40.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 38.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 38.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 33.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 32.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 32.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 31.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 31.0
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 30.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 28.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 28.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.6
FF:10153-102I9 76 years, female 31.9
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.2
Sample A Female 5.0
Sample B Female 4.3
Sample C Male 4.3
Sample D Male 3.2
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 4.2
Min nTPM: 3.5
Sample A Female 3.7
Sample B Female 3.7
Sample C Male 4.2
Sample D Male 3.5
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.5
Sample A Female 4.7
Sample B Female 4.0
Sample C Male 3.6
Sample D Male 3.5
Ventral hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.6
Sample A Female 4.1
Sample B Female 3.6
Sample C Male 4.6
Sample D Male 4.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 15.6
Min nTPM: 14.3
Sample A Male 14.3
Sample B Male 15.3
Sample C Female 15.6
Sample D Female 15.1
Hippocampal formation
nTPM: 15.8
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.6
Sample A Male 13.6
Sample B Male 16.1
Sample C Female 14.3
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69608905 Antisense, RP_050426_04_D12, Mouse strain C57BL/6J (56 days, male) 0.7

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