HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:78.6 nTPM
HPA:78.6 nTPM
GTEx:82.3 nTPM
FANTOM5:145.6 Scaled Tags Per Million
Pig:182.2 nTPM
Mouse:356.6 nTPM
Allen mouse:23.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040347
Glial cells Medium
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.6
Sample id Sample description nTPM
Hippocampus
nTPM: 52.7
1898 Male, age 80, left hemisphere 83.4
1855 Male, age 76, left hemisphere 56.4
2621 Female, age 67, right hemisphere 49.0
1911 Female, age 85, right hemisphere 45.2
2529 Female, age 94, left hemisphere 41.7
2148 Female, age 91, left hemisphere 40.2
Dentate gyrus
nTPM: 54.8
1927 Female, age 91, both hemispheres 74.4
2010 Male, age 76, both hemispheres 67.5
2246 Female, age 85, both hemispheres 54.6
2528 Male, age 74, both hemispheres 47.7
2530 Female, age 94, left hemisphere 42.8
2531 Female, age 67, both hemispheres 41.8
Entorhinal gyrus
nTPM: 51.3
1938 Female, age 85, left hemisphere 74.8
1787 Male, age 76, left hemisphere 58.9
2764 Male, age 80, right hemisphere 58.2
2613 Female, age 94, left hemisphere 40.6
2117 Female, age 91, right hemisphere 39.6
2686 Male, age 75, right hemisphere 35.8
Hippocampus, CA1
nTPM: 70.1
2749 Male, age 80, left hemisphere 121.9
1873 Female, age 85, both hemispheres 73.9
2045 Male, age 76, both hemispheres 64.8
2527 Male, age 74, both hemispheres 51.6
2082 Female, age 91, right hemisphere 38.1
Hippocampus, CA2
nTPM: 56.0
1892 Male, age 76, both hemispheres 85.8
1963 Male, age 80, left hemisphere 79.2
2249 Male, age 74, both hemispheres 48.4
1940 Female, age 85, left hemisphere 45.3
2113 Female, age 91, right hemisphere 38.9
2437 Female, age 94, left hemisphere 38.3
Hippocampus, CA3
nTPM: 56.2
2137 Male, age 80, left hemisphere 97.5
1867 Male, age 76, both hemispheres 67.0
1891 Female, age 85, both hemispheres 55.7
2436 Male, age 74, both hemispheres 45.4
2620 Female, age 94, left hemisphere 42.0
2861 Female, age 67, both hemispheres 29.4
Parahippocampal cortex
nTPM: 55.2
1850 Male, age 80, both hemispheres 88.7
1990 Female, age 91, right hemisphere 66.6
1933 Female, age 85, both hemispheres 64.6
2532 Female, age 72, left hemisphere 55.5
2250 Female, age 67, right hemisphere 55.3
2245 Female, age 91, both hemispheres 53.9
2693 Female, age 94, both hemispheres 51.5
2018 Male, age 76, both hemispheres 47.5
2692 Male, age 74, both hemispheres 38.8
2622 Female, age 67, right hemisphere 29.6
Perirhinal gyrus
nTPM: 78.6
1847 Female, age 91, left hemisphere 90.8
1841 Female, age 85, right hemisphere 85.9
1794 Male, age 80, right hemisphere 82.9
2521 Female, age 94, right hemisphere 69.2
2848 Male, age 76, right hemisphere 64.1
Subiculum
nTPM: 49.9
1977 Female, age 85, both hemispheres 69.7
1901 Male, age 80, both hemispheres 64.3
2438 Female, age 94, left hemisphere 47.0
2042 Male, age 76, both hemispheres 42.9
2619 Male, age 74, both hemispheres 39.6
2729 Female, age 91, right hemisphere 36.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 82.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 82.3
Samples: 197

Max nTPM: 178.7
Min nTPM: 33.7
Std nTPM: 28.3
Median nTPM: 75.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 178.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 168.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 161.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 155.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 152.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 148.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 143.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 140.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 139.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 139.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 136.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 145.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 145.6
FF:10169-103B7 60 years, female 156.9
FF:10153-102I9 76 years, female 134.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 182.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 182.2
Samples: 4

Max nTPM: 219.7
Min nTPM: 134.5
Sample A Female 219.7
Sample B Female 191.6
Sample C Male 183.0
Sample D Male 134.5
Entorhinal cortex
nTPM: 160.9
Samples: 4

Max nTPM: 182.2
Min nTPM: 133.9
Sample A Female 176.1
Sample B Female 182.2
Sample C Male 151.5
Sample D Male 133.9
Subiculum
nTPM: 168.4
Samples: 4

Max nTPM: 217.3
Min nTPM: 148.0
Sample A Female 217.3
Sample B Female 149.0
Sample C Male 148.0
Sample D Male 159.1
Ventral hippocampus
nTPM: 157.1
Samples: 4

Max nTPM: 190.0
Min nTPM: 129.5
Sample A Female 190.0
Sample B Female 129.5
Sample C Male 133.0
Sample D Male 175.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 356.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 314.6
Samples: 4

Max nTPM: 352.3
Min nTPM: 296.8
Sample A Male 302.0
Sample B Male 307.4
Sample C Female 296.8
Sample D Female 352.3
Hippocampal formation
nTPM: 356.6
Samples: 4

Max nTPM: 401.6
Min nTPM: 305.1
Sample A Male 334.1
Sample B Male 385.7
Sample C Female 401.6
Sample D Female 305.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.1
583577 Antisense, RP_040831_02_G12, Mouse strain C57BL/6J (56 days, male) 23.1

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