HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:53.2 nTPM
HPA:53.2 nTPM
GTEx:132.1 nTPM
FANTOM5:0.1 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:1.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.2
Sample id Sample description nTPM
Hippocampus
nTPM: 53.2
2148 Female, age 91, left hemisphere 82.2
2621 Female, age 67, right hemisphere 78.5
2529 Female, age 94, left hemisphere 58.5
1911 Female, age 85, right hemisphere 46.1
1898 Male, age 80, left hemisphere 31.7
1855 Male, age 76, left hemisphere 22.5
Dentate gyrus
nTPM: 49.1
2531 Female, age 67, both hemispheres 104.6
1927 Female, age 91, both hemispheres 47.3
2530 Female, age 94, left hemisphere 40.0
2528 Male, age 74, both hemispheres 38.5
2010 Male, age 76, both hemispheres 34.5
2246 Female, age 85, both hemispheres 29.6
Entorhinal gyrus
nTPM: 32.0
2613 Female, age 94, left hemisphere 48.8
2764 Male, age 80, right hemisphere 33.0
2686 Male, age 75, right hemisphere 32.3
2117 Female, age 91, right hemisphere 29.5
1787 Male, age 76, left hemisphere 27.2
1938 Female, age 85, left hemisphere 21.2
Hippocampus, CA1
nTPM: 28.4
2527 Male, age 74, both hemispheres 47.5
2045 Male, age 76, both hemispheres 38.1
1873 Female, age 85, both hemispheres 29.0
2749 Male, age 80, left hemisphere 27.5
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 30.3
1963 Male, age 80, left hemisphere 57.8
1940 Female, age 85, left hemisphere 33.9
2249 Male, age 74, both hemispheres 32.5
2437 Female, age 94, left hemisphere 27.1
1892 Male, age 76, both hemispheres 17.2
2113 Female, age 91, right hemisphere 13.2
Hippocampus, CA3
nTPM: 39.7
2861 Female, age 67, both hemispheres 83.9
2620 Female, age 94, left hemisphere 83.0
1867 Male, age 76, both hemispheres 22.4
2436 Male, age 74, both hemispheres 20.2
1891 Female, age 85, both hemispheres 15.9
2137 Male, age 80, left hemisphere 12.7
Parahippocampal cortex
nTPM: 30.3
2622 Female, age 67, right hemisphere 65.1
2245 Female, age 91, both hemispheres 49.1
1990 Female, age 91, right hemisphere 35.3
2532 Female, age 72, left hemisphere 33.0
2692 Male, age 74, both hemispheres 29.0
2250 Female, age 67, right hemisphere 25.5
1933 Female, age 85, both hemispheres 20.3
2018 Male, age 76, both hemispheres 19.3
2693 Female, age 94, both hemispheres 15.3
1850 Male, age 80, both hemispheres 10.7
Perirhinal gyrus
nTPM: 17.1
2521 Female, age 94, right hemisphere 27.4
1794 Male, age 80, right hemisphere 24.0
1847 Female, age 91, left hemisphere 14.7
2848 Male, age 76, right hemisphere 10.7
1841 Female, age 85, right hemisphere 8.7
Subiculum
nTPM: 27.6
2729 Female, age 91, right hemisphere 52.0
2619 Male, age 74, both hemispheres 33.0
1977 Female, age 85, both hemispheres 26.4
2438 Female, age 94, left hemisphere 20.6
2042 Male, age 76, both hemispheres 17.0
1901 Male, age 80, both hemispheres 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 132.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 132.1
Samples: 197

Max nTPM: 505.3
Min nTPM: 7.4
Std nTPM: 85.5
Median nTPM: 110.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 505.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 392.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 352.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 351.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 347.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 327.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 307.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 303.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 301.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 299.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 297.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.1
FF:10153-102I9 76 years, female 0.3
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.1
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Subiculum
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.7
Min nTPM: 1.0
Sample A Male 1.3
Sample B Male 1.7
Sample C Female 1.1
Sample D Female 1.0
Hippocampal formation
nTPM: 0.9
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.7
Sample A Male 0.9
Sample B Male 1.0
Sample C Female 0.9
Sample D Female 0.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
75990859 Antisense, RP_060608_01_F09, Mouse strain C57BL/6J (56 days, male) 0.1

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