HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.4 nTPM
HPA:25.4 nTPM
GTEx:15.7 nTPM
FANTOM5:41.0 Scaled Tags Per Million
Pig:10.2 nTPM
Mouse:7.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040234
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
2529 Female, age 94, left hemisphere 25.6
2148 Female, age 91, left hemisphere 23.6
1855 Male, age 76, left hemisphere 22.9
2621 Female, age 67, right hemisphere 22.7
1898 Male, age 80, left hemisphere 22.0
1911 Female, age 85, right hemisphere 20.1
Dentate gyrus
nTPM: 23.5
2531 Female, age 67, both hemispheres 25.6
2530 Female, age 94, left hemisphere 24.1
2246 Female, age 85, both hemispheres 23.9
2528 Male, age 74, both hemispheres 22.8
1927 Female, age 91, both hemispheres 22.7
2010 Male, age 76, both hemispheres 21.9
Entorhinal gyrus
nTPM: 25.4
2613 Female, age 94, left hemisphere 27.2
1787 Male, age 76, left hemisphere 26.8
2764 Male, age 80, right hemisphere 26.3
2686 Male, age 75, right hemisphere 25.7
1938 Female, age 85, left hemisphere 23.8
2117 Female, age 91, right hemisphere 22.6
Hippocampus, CA1
nTPM: 23.2
2749 Male, age 80, left hemisphere 24.2
2082 Female, age 91, right hemisphere 23.5
2527 Male, age 74, both hemispheres 23.3
2045 Male, age 76, both hemispheres 22.8
1873 Female, age 85, both hemispheres 22.4
Hippocampus, CA2
nTPM: 22.3
2437 Female, age 94, left hemisphere 24.3
1892 Male, age 76, both hemispheres 23.3
2113 Female, age 91, right hemisphere 22.9
1940 Female, age 85, left hemisphere 21.8
2249 Male, age 74, both hemispheres 21.3
1963 Male, age 80, left hemisphere 20.2
Hippocampus, CA3
nTPM: 24.5
2620 Female, age 94, left hemisphere 29.0
2861 Female, age 67, both hemispheres 25.5
1867 Male, age 76, both hemispheres 24.4
2137 Male, age 80, left hemisphere 24.2
2436 Male, age 74, both hemispheres 22.2
1891 Female, age 85, both hemispheres 21.9
Parahippocampal cortex
nTPM: 24.7
2622 Female, age 67, right hemisphere 26.6
1990 Female, age 91, right hemisphere 25.8
2692 Male, age 74, both hemispheres 25.4
1850 Male, age 80, both hemispheres 25.0
2532 Female, age 72, left hemisphere 24.8
1933 Female, age 85, both hemispheres 24.7
2693 Female, age 94, both hemispheres 24.4
2250 Female, age 67, right hemisphere 23.9
2018 Male, age 76, both hemispheres 23.3
2245 Female, age 91, both hemispheres 23.1
Perirhinal gyrus
nTPM: 25.1
1847 Female, age 91, left hemisphere 27.2
2848 Male, age 76, right hemisphere 25.4
1794 Male, age 80, right hemisphere 25.0
1841 Female, age 85, right hemisphere 24.5
2521 Female, age 94, right hemisphere 23.6
Subiculum
nTPM: 23.5
2619 Male, age 74, both hemispheres 25.6
2438 Female, age 94, left hemisphere 25.1
1977 Female, age 85, both hemispheres 23.8
1901 Male, age 80, both hemispheres 23.1
2042 Male, age 76, both hemispheres 21.8
2729 Female, age 91, right hemisphere 21.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.7
Samples: 197

Max nTPM: 36.5
Min nTPM: 6.7
Std nTPM: 4.7
Median nTPM: 15.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 36.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 32.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 30.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 28.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 28.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 27.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 24.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 24.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 23.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 23.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.0
FF:10153-102I9 76 years, female 43.4
FF:10169-103B7 60 years, female 38.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.5
Sample A Female 10.6
Sample B Female 9.7
Sample C Male 9.0
Sample D Male 8.5
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.6
Sample A Female 9.2
Sample B Female 7.6
Sample C Male 9.4
Sample D Male 9.0
Subiculum
nTPM: 9.3
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.2
Sample A Female 10.6
Sample B Female 8.5
Sample C Male 10.0
Sample D Male 8.2
Ventral hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 12.4
Min nTPM: 7.9
Sample A Female 10.9
Sample B Female 7.9
Sample C Male 12.4
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 7.3
Sample A Male 8.3
Sample B Male 7.3
Sample C Female 7.5
Sample D Female 8.4
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.7
Sample A Male 6.7
Sample B Male 8.1
Sample C Female 7.2
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74822874 Antisense, RP_051121_03_H02, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.