We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HSPA1A
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • HSPA1A
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:3.5 nTPM
HPA:3.5 nTPM
GTEx:643.0 nTPM
FANTOM5:1149.1 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 3.5
Sample id Sample description nTPM
Amygdala
nTPM: 3.2
1987 Female, age 91, left hemisphere 3.3
2514 Male, age 75, right hemisphere 3.3
2695 Female, age 67, right hemisphere 3.3
2517 Female, age 94, left hemisphere 3.1
2814 Male, age 76, right hemisphere 2.9
Basal amygdala
nTPM: 3.5
2609 Male, age 75, right hemisphere 4.1
2685 Female, age 94, left hemisphere 3.7
2243 Female, age 91, right hemisphere 3.5
2110 Male, age 80, left hemisphere 3.3
2827 Female, age 67, right hemisphere 3.3
1955 Male, age 76, both hemispheres 3.2
Central amygdala
nTPM: 3.4
2515 Male, age 75, right hemisphere 4.0
2701 Female, age 91, right hemisphere 3.7
2239 Male, age 80, left hemisphere 3.4
1905 Male, age 76, both hemispheres 3.1
2826 Female, age 94, left hemisphere 2.9
Corticomedial amygdala
nTPM: 3.3
2429 Female, age 94, left hemisphere 3.6
2428 Male, age 75, right hemisphere 3.4
2242 Female, age 91, right hemisphere 3.3
2535 Female, age 67, right hemisphere 3.3
2829 Male, age 80, left hemisphere 3.3
2240 Male, age 76, both hemispheres 2.8
Lateral amygdala
nTPM: 3.3
2255 Female, age 91, right hemisphere 3.4
1883 Male, age 76, both hemispheres 3.3
2256 Male, age 80, left hemisphere 3.3
2830 Female, age 67, right hemisphere 3.3
2534 Female, age 94, left hemisphere 3.2
2516 Male, age 75, right hemisphere 3.1
Stria terminalis, bed nucleus
nTPM: 3.0
2201 Male, age 74, unknown 3.3
1974 Female, age 91, both hemispheres 3.0
2486 Female, age 94, both hemispheres 2.8

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 643.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 643.0
Samples: 152

Max nTPM: 8072.1
Min nTPM: 45.2
Std nTPM: 1218.7
Median nTPM: 203.4
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 8072.1
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 6831.1
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 5451.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 4945.1
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 4377.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 4350.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 3812.0
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 3336.8
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 2894.5
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 2400.8
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 2200.7
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 2020.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1825.6
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1823.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1725.5
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1533.8
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 1479.7
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1436.1
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1381.6
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 1240.1
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1194.0
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1156.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 986.6
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 984.5
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 983.4
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 860.0
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 811.7
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 654.4
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 604.6
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 593.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 592.3
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 586.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 570.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 564.6
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 544.0
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 538.8
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 533.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 515.3
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 511.3
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 500.0
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 491.4
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 458.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 438.3
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 418.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 394.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 393.4
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 385.4
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 369.0
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 358.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 350.6
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 347.0
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 344.6
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 344.5
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 342.5
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 337.1
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 327.1
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 321.7
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 311.4
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 304.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 297.6
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 287.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 267.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 245.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 243.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 241.7
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 241.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 240.2
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 235.0
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 234.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 233.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 226.1
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 219.7
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 215.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 210.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 208.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 205.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 200.9
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 200.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 198.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 189.4
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 188.9
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 188.4
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 187.3
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 180.9
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 179.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 177.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 176.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 175.0
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 169.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 167.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 167.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 165.5
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 162.9
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 161.1
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 159.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 156.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 151.6
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 145.2
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 144.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 138.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 137.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 136.8
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 135.8
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 134.6
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 131.7
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 127.9
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 127.5
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 127.2
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 126.7
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 125.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 125.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 123.6
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 120.9
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 120.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 117.9
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 117.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 116.0
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 112.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 111.6
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 110.8
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 110.6
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 110.3
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 108.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 107.6
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 105.4
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 102.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 100.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 98.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 95.3
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 93.8
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 92.3
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 86.6
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 83.7
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 83.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 83.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 83.1
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 81.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 80.1
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 79.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 77.8
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 77.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 70.8
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 67.1
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 67.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 63.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 60.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 59.5
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 57.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 56.8
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 52.4
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 48.7
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 45.2
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1149.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 1149.1
FF:10151-102I7 76 years, female 1149.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.