COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.6 nTPM
HPA:11.3 nTPM
GTEx:32.6 nTPM
FANTOM5:58.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA037400
Endothelial cells Medium
Glandular cells Medium
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 11.3
overview
Male, age 54 		Colon sample 67
nTPM: 8.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 12.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 14.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 9.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 11.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 23.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 11.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 10.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 8.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 9.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 7.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 32.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 32.6
Samples: 373

Max nTPM: 76.3
Min nTPM: 13.1
Std nTPM: 7.5
Median nTPM: 32.0
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 76.3
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 51.8
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 51.3
GTEX-1CAMS-2626-SM-7PBY3 40-49 years, female 50.3
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 49.7
GTEX-1R9JW-2126-SM-E76QT 30-39 years, female 48.6
GTEX-1F5PK-1726-SM-7RHHW 50-59 years, male 48.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 47.8
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 47.0
GTEX-17KNJ-1826-SM-7LT9N 50-59 years, male 46.9
GTEX-1HFI7-1626-SM-9WYTR 50-59 years, female 46.8
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Colon - Transverse
Average nTPM: 31.8
Samples: 406

Max nTPM: 58.5
Min nTPM: 18.3
Std nTPM: 5.3
Median nTPM: 31.2
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 58.5
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 52.2
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 51.5
GTEX-14E1K-1826-SM-793DT 50-59 years, male 51.4
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 51.1
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 47.7
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 46.9
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 45.6
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 45.5
GTEX-1C64O-2326-SM-73KU8 60-69 years, male 45.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 44.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 58.2
FF:10014-101C5 62,83,84 years, mixed 58.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.