HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.6 nTPM
HPA:18.6 nTPM
GTEx:7.2 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:1.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.6
Sample id Sample description nTPM
Hippocampus
nTPM: 18.2
2529 Female, age 94, left hemisphere 18.8
1911 Female, age 85, right hemisphere 18.7
2621 Female, age 67, right hemisphere 18.6
1855 Male, age 76, left hemisphere 18.5
2148 Female, age 91, left hemisphere 17.7
1898 Male, age 80, left hemisphere 16.6
Dentate gyrus
nTPM: 17.9
2530 Female, age 94, left hemisphere 19.4
2246 Female, age 85, both hemispheres 18.3
2531 Female, age 67, both hemispheres 18.0
2528 Male, age 74, both hemispheres 17.8
2010 Male, age 76, both hemispheres 17.2
1927 Female, age 91, both hemispheres 16.9
Entorhinal gyrus
nTPM: 17.5
2686 Male, age 75, right hemisphere 19.1
2764 Male, age 80, right hemisphere 17.8
2117 Female, age 91, right hemisphere 17.6
2613 Female, age 94, left hemisphere 17.6
1787 Male, age 76, left hemisphere 17.3
1938 Female, age 85, left hemisphere 15.7
Hippocampus, CA1
nTPM: 17.0
2082 Female, age 91, right hemisphere 19.2
1873 Female, age 85, both hemispheres 18.2
2527 Male, age 74, both hemispheres 16.5
2045 Male, age 76, both hemispheres 16.4
2749 Male, age 80, left hemisphere 14.4
Hippocampus, CA2
nTPM: 17.5
1940 Female, age 85, left hemisphere 20.1
2113 Female, age 91, right hemisphere 18.6
2437 Female, age 94, left hemisphere 17.7
1963 Male, age 80, left hemisphere 16.5
2249 Male, age 74, both hemispheres 16.5
1892 Male, age 76, both hemispheres 15.5
Hippocampus, CA3
nTPM: 17.8
2620 Female, age 94, left hemisphere 20.5
2861 Female, age 67, both hemispheres 19.3
1891 Female, age 85, both hemispheres 19.1
2436 Male, age 74, both hemispheres 16.6
1867 Male, age 76, both hemispheres 15.9
2137 Male, age 80, left hemisphere 15.2
Parahippocampal cortex
nTPM: 17.1
2692 Male, age 74, both hemispheres 18.3
2018 Male, age 76, both hemispheres 18.0
2622 Female, age 67, right hemisphere 17.6
1990 Female, age 91, right hemisphere 17.4
2245 Female, age 91, both hemispheres 16.9
2250 Female, age 67, right hemisphere 16.9
2693 Female, age 94, both hemispheres 16.9
2532 Female, age 72, left hemisphere 16.7
1850 Male, age 80, both hemispheres 16.0
1933 Female, age 85, both hemispheres 16.0
Perirhinal gyrus
nTPM: 15.9
2848 Male, age 76, right hemisphere 16.8
1847 Female, age 91, left hemisphere 16.2
1841 Female, age 85, right hemisphere 15.8
2521 Female, age 94, right hemisphere 15.8
1794 Male, age 80, right hemisphere 15.1
Subiculum
nTPM: 18.6
2042 Male, age 76, both hemispheres 19.9
2729 Female, age 91, right hemisphere 19.0
1901 Male, age 80, both hemispheres 18.9
2619 Male, age 74, both hemispheres 18.6
2438 Female, age 94, left hemisphere 18.3
1977 Female, age 85, both hemispheres 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.2
Samples: 197

Max nTPM: 54.5
Min nTPM: 0.0
Std nTPM: 7.0
Median nTPM: 5.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 54.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 34.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 30.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 30.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 29.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 25.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 25.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 24.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 23.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 21.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 20.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10153-102I9 76 years, female 0.1
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Subiculum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Male 0.3
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.2
Hippocampal formation
nTPM: 1.2
Samples: 4

Max nTPM: 2.7
Min nTPM: 0.0
Sample A Male 1.3
Sample B Male 2.7
Sample C Female 0.0
Sample D Female 0.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74076030 Antisense, RP_051219_02_F03, Mouse strain C57BL/6J (56 days, male) 0.1

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