BASAL GANGLIA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:3.8 nTPM
HPA:3.8 nTPM
GTEx:0.3 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 3.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 3.4
1857 Female, age 85, left hemisphere 4.1
2481 Female, age 94, left hemisphere 3.7
1854 Male, age 80, left hemisphere 3.6
2290 Female, age 72, unknown 3.6
2289 Male, age 61, right hemisphere 3.2
2288 Male, age 75, left hemisphere 3.0
2846 Female, age 79, unknown 3.0
1781 Male, age 74, unknown 2.9
Claustrum
nTPM: 3.0
2392 Female, age 94, both hemispheres 3.4
2198 Male, age 80, both hemispheres 3.3
2284 Female, age 91, both hemispheres 3.2
2292 Female, age 85, both hemispheres 3.2
1956 Male, age 74, unknown 3.0
2491 Male, age 75, both hemispheres 2.8
2568 Male, age 61, both hemispheres 2.7
2645 Female, age 72, unknown 2.7
2196 Female, age 79, unknown 2.6
Globus pallidus, externus
nTPM: 3.3
2395 Male, age 75, both hemispheres 3.8
1996 Male, age 80, right hemisphere 3.4
2772 Female, age 79, unknown 3.3
2646 Male, age 61, right hemisphere 3.1
2567 Female, age 72, unknown 2.9
Globus pallidus, internus
nTPM: 3.8
2111 Female, age 85, right hemisphere 4.4
2287 Male, age 75, right hemisphere 4.0
2037 Male, age 80, right hemisphere 3.9
2778 Female, age 91, both hemispheres 3.7
1818 Male, age 74, unknown 3.6
2566 Female, age 72, unknown 3.5
2483 Female, age 94, right hemisphere 3.4
Nucleus accumbens
nTPM: 3.2
2391 Female, age 94, left hemisphere 4.0
2286 Male, age 75, left hemisphere 3.3
1806 Female, age 85, left hemisphere 3.2
1856 Female, age 91, right hemisphere 3.2
2698 Female, age 72, unknown 3.2
2824 Male, age 61, right hemisphere 3.1
1783 Male, age 74, unknown 2.9
2732 Male, age 80, right hemisphere 2.9
Nucleus basalis of Meynert
nTPM: 3.3
2393 Male, age 80, right hemisphere 3.8
2484 Female, age 94, left hemisphere 3.6
2569 Male, age 61, both hemispheres 3.0
2821 Male, age 75, both hemispheres 3.0
Nucleus of the diagonal band
nTPM: 3.0
2029 Male, age 61, right hemisphere 3.3
1812 Female, age 91, both hemispheres 3.0
1979 Male, age 74, unknown 3.0
2775 Male, age 80, right hemisphere 2.8
2195 Female, age 85, both hemispheres 2.7
Olfactory tubercle
nTPM: 3.0
1998 Female, age 91, both hemispheres 3.3
2487 Female, age 94, left hemisphere 2.9
1846 Male, age 80, right hemisphere 2.8
2856 Male, age 75, right hemisphere 2.8
Putamen
nTPM: 3.6
1829 Male, age 74, unknown 4.2
2489 Female, age 72, unknown 4.0
1838 Male, age 80, right hemisphere 3.6
2482 Female, age 94, left hemisphere 3.6
2466 Female, age 79, unknown 3.3
1937 Female, age 91, right hemisphere 3.2
2647 Male, age 75, left hemisphere 2.9
Septal nuclei
nTPM: 3.0
2199 Male, age 80, right hemisphere 3.5
2394 Male, age 61, left hemisphere 3.3
2009 Female, age 91, both hemispheres 3.1
2059 Female, age 85, both hemispheres 3.0
2629 Female, age 94, right hemisphere 2.9
2031 Female, age 72, unknown 2.7
1960 Male, age 74, unknown 2.6

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.3
Samples: 246

Max nTPM: 2.1
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 2.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.3
Samples: 246

Max nTPM: 2.0
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 2.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 1.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 1.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 0.3
Samples: 205

Max nTPM: 1.7
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 0.9
Show allShow less

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.