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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bowman's capsule: Not detected
Cells in glomeruli: Not detected
Collecting ducts: High
Distal tubules: High
Proximal tubules (cell body): Medium
Proximal tubules (microvilli): Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:200.9 nTPM
HPA:200.9 nTPM
GTEx:166.0 nTPM
FANTOM5:388.3 Scaled Tags Per Million

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA030780Antibody CAB005885Antibody CAB072343
Bowman's capsule Not detected--
Cells in glomeruli Not detectedHighLow
Cells in tubules -HighHigh
Collecting ducts High--
Distal tubules High--
Proximal tubules (cell body) Medium--
Proximal tubules (microvilli) Not detected--







KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 200.9
overview
Female, age 58
Kidney sample 55
nTPM: 168.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 173
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 115.6
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 176
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 250.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 218.9
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 306.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 201.5
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 197.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 166.0
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 166.0
Samples: 85

Max nTPM: 309.4
Min nTPM: 52.6
Std nTPM: 50.7
Median nTPM: 159.8
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 309.4
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 293.4
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 277.2
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 264.6
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 258.4
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 257.2
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 243.4
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 241.7
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 236.5
GTEX-14C39-2126-SM-664OH 40-49 years, male 230.4
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 224.0
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 222.8
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 219.2
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 218.5
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 215.4
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 205.7
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 205.6
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 204.9
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 204.7
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 199.8
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 198.7
GTEX-O5YV-1226-SM-EV795 60-69 years, female 197.2
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 194.1
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 193.9
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 192.8
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 184.8
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 184.6
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 183.9
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 179.2
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 178.7
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 178.5
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 176.1
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 175.6
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 168.6
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 168.3
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 167.5
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 165.9
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 163.4
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 162.0
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 161.6
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 160.1
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 159.9
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 159.8
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 159.4
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 159.4
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 157.6
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 155.7
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 154.8
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 153.7
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 152.6
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 152.5
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 150.4
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 149.5
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 149.5
GTEX-12696-0926-SM-5FQTV 60-69 years, male 147.1
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 145.3
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 143.4
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 143.0
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 142.8
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 141.2
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 138.2
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 134.0
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 131.5
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 130.0
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 129.0
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 126.9
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 126.5
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 126.4
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 126.4
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 125.7
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 124.5
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 120.4
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 119.3
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 118.7
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 114.0
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 107.9
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 105.7
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 101.6
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 99.5
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 91.9
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 87.6
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 85.3
GTEX-13112-2126-SM-5GCO4 50-59 years, male 80.3
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 61.0
GTEX-RN64-1626-SM-48FD7 50-59 years, male 52.6
Show allShow less
Kidney - Medulla
Average nTPM: 144.8
Samples: 4

Max nTPM: 230.9
Min nTPM: 84.7
Std nTPM: 53.4
Median nTPM: 131.8
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 230.9
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 137.1
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 126.4
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 84.7

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 388.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 388.3
FF:10017-101C8 60,62,63 years, female 388.3

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.