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ATP6V1G2
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  • ATP6V1G2
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:53.0 nTPM
HPA:53.0 nTPM
GTEx:242.9 nTPM
FANTOM5:372.2 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 53.0
Sample id Sample description nTPM
Amygdala
nTPM: 43.1
2814 Male, age 76, right hemisphere 62.3
1987 Female, age 91, left hemisphere 42.4
2695 Female, age 67, right hemisphere 39.4
2517 Female, age 94, left hemisphere 38.8
2514 Male, age 75, right hemisphere 32.7
Basal amygdala
nTPM: 43.1
2110 Male, age 80, left hemisphere 49.6
1955 Male, age 76, both hemispheres 48.7
2243 Female, age 91, right hemisphere 47.1
2685 Female, age 94, left hemisphere 41.8
2827 Female, age 67, right hemisphere 37.0
2609 Male, age 75, right hemisphere 34.6
Central amygdala
nTPM: 45.8
1905 Male, age 76, both hemispheres 55.4
2826 Female, age 94, left hemisphere 50.9
2701 Female, age 91, right hemisphere 42.6
2239 Male, age 80, left hemisphere 41.7
2515 Male, age 75, right hemisphere 38.5
Corticomedial amygdala
nTPM: 46.5
2829 Male, age 80, left hemisphere 59.8
2240 Male, age 76, both hemispheres 54.2
2429 Female, age 94, left hemisphere 44.9
2242 Female, age 91, right hemisphere 42.9
2535 Female, age 67, right hemisphere 39.8
2428 Male, age 75, right hemisphere 37.2
Lateral amygdala
nTPM: 37.6
1883 Male, age 76, both hemispheres 47.2
2256 Male, age 80, left hemisphere 40.3
2534 Female, age 94, left hemisphere 38.6
2255 Female, age 91, right hemisphere 35.8
2516 Male, age 75, right hemisphere 33.5
2830 Female, age 67, right hemisphere 30.3
Stria terminalis, bed nucleus
nTPM: 53.0
1974 Female, age 91, both hemispheres 67.5
2486 Female, age 94, both hemispheres 48.0
2201 Male, age 74, unknown 43.4

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 242.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 242.9
Samples: 152

Max nTPM: 729.7
Min nTPM: 18.9
Std nTPM: 115.0
Median nTPM: 212.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 729.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 592.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 556.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 551.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 507.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 494.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 463.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 427.4
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 426.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 418.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 417.9
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 400.7
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 393.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 388.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 383.2
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 379.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 379.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 378.8
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 372.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 371.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 359.0
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 357.3
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 357.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 356.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 354.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 351.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 350.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 345.7
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 343.9
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 332.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 331.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 328.3
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 328.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 322.1
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 319.5
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 315.9
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 315.8
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 315.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 308.9
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 307.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 304.4
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 304.2
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 302.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 301.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 300.8
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 289.7
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 288.9
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 288.5
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 285.5
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 285.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 283.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 277.2
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 276.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 274.6
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 272.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 272.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 272.0
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 269.0
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 266.9
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 266.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 264.0
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 259.2
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 259.2
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 259.1
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 256.2
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 252.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 246.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 238.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 234.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 234.4
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 230.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 228.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 224.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 223.6
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 222.2
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 212.4
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 211.9
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 211.0
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 210.6
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 210.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 208.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 206.9
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 205.8
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 204.8
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 201.3
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 201.0
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 200.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 200.0
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 198.4
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 197.5
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 197.2
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 195.1
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 194.7
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 191.6
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 191.4
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 189.9
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 188.5
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 187.5
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 183.1
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 182.6
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 181.2
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 176.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 176.1
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 175.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 175.7
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 174.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 173.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 171.7
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 171.4
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 169.8
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 165.9
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 165.8
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 164.9
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 164.4
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 163.3
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 161.2
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 160.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 160.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 151.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 150.5
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 150.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 145.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 144.6
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 142.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 140.1
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 138.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 138.0
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 134.6
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 132.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 129.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 129.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 126.4
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 125.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 119.4
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 117.7
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 115.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 113.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 110.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 109.1
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 106.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 105.6
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 102.9
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 100.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 100.3
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 99.3
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 98.7
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 93.5
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 70.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 69.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 56.7
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 54.4
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 18.9
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 372.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 372.2
FF:10151-102I7 76 years, female 372.2

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